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Report for CCDS37437.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37437.1 Public Mus musculus 17 Acat2 23 108 98 CCDS HistoryNCBI Gene:110460Re-query CCDS DB by CCDS ID:37437.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37437.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000007005.13 ENSMUSP00000007005.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000007005.13Link to Ensembl Protein Viewer:ENSMUSP00000007005.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000007005Re-query CCDS DB by Protein ID:ENSMUSP00000007005
Original member Current member NCBI NM_009338.3 NP_033364.2 Accepted alive Link to Nucleotide Sequence:NM_009338.3Link to Protein Sequence:NP_033364.2Re-query CCDS DB by Nucleotide ID:NM_009338Re-query CCDS DB by Protein ID:NP_033364Link to BLAST:NP_033364.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033364.2 397 Q8CAY6 397 100% 0 0

Chromosomal Locations for CCDS 37437.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 12943862 12944032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12944400 12944510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12946261 12946415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12947357 12947479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12948514 12948657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12952252 12952369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12956219 12956400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12959995 12960129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12960609 12960663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1194 nt):
ATGAATGCGGGCTCAGACCCCGTGGTCATCGTCTCAGCGGCGCGCACCGCTATAGGCTCCTTCAATGGTG
CCCTGTCCACCGTGCCTGTCCACGAAATGGGGACAACTGTCATCAAAGAAGTCCTGCAGAGGGCCAAGGT
GGCTCCAGAAGAGGTGTCCGAGGTCATATTTGGACATGTCTTGACGGCAGGTTGTGGGCAGAATCCTACT
CGACAAGCCAGTGTGGGTGCAGGGATCCCCTATTCGGTTCCAGCATGGAGCTGCCAGATGATCTGTGGCT
CGGGCCTAAAAGCCGTGTGTCTTGCAGCCCAGTCCATAGCCATGGGCGACTCCACCATTGTGGTAGCTGG
AGGCATGGAGAATATGAGCAAGGCTCCTCACTTGACTCACCTGAGAACAGGAGTCAGGATGGGTGAGGTG
CCACTGGCTGACAGCATACTCTGTGATGGTCTGACAGATGCCTTTCACAACTACCACATGGGCATCACAG
CTGAAAACGTAGCCAAAAAATGGCAAGTGAGCAGAGAGGCCCAGGACAAGGTTGCAGTTCTGTCACAGAA
CAGGGCAGAGCATGCTCAGAAAGCTGGCCACTTTGACAAGGAGATTGTGCCAGTGCTGGTGTCTTCCAGA
AAAGGTCTTACTGAAGTGAAAATCGATGAATTTCCCCGTCATGGGAGTAACCTTGAAGCCATGGGCAAGC
TGAAACCTTACTTTCTTACTGATGGGACAGGAACTGTCACCCCAGCGAACGCATCAGGAATGAACGATGG
CGCTGCTGCTGTGGTCCTTATGAAGAAGACAGAAGCTGAGAGGCGGATGCTGAAACCTTTAGCAAGAATA
GTCTCCTGGTCCCAAGCCGGTGTGGAGCCTTCTGTTATGGGAGTAGGACCAATTCCAGCCATAAAGCAAG
CTGTTGCAAAGGCAGGCTGGTCCCTGGAGGATGTTGACCTGTTTGAAATCAATGAAGCCTTTGCAGCGGT
GTCTGCGGCAATAGCTAAAGAACTTGGATTAAACCCCGAGAAGGTCAACATCGATGGAGGAGCCATTGCC
TTGGGCCATCCTCTGGGAGCATCTGGCTGCAGGATTCTAGTGACCTTGCTGCACACCCTGGAGAGAGTGG
GCGGGACCCGTGGTGTTGCAGCCCTGTGCATTGGGGGTGGGATGGGAGTCGCAATGTGTGTTCAGAGAGG
GTGA

Translation (397 aa):
MNAGSDPVVIVSAARTAIGSFNGALSTVPVHEMGTTVIKEVLQRAKVAPEEVSEVIFGHVLTAGCGQNPT
RQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQSIAMGDSTIVVAGGMENMSKAPHLTHLRTGVRMGEV
PLADSILCDGLTDAFHNYHMGITAENVAKKWQVSREAQDKVAVLSQNRAEHAQKAGHFDKEIVPVLVSSR
KGLTEVKIDEFPRHGSNLEAMGKLKPYFLTDGTGTVTPANASGMNDGAAAVVLMKKTEAERRMLKPLARI
VSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDLFEINEAFAAVSAAIAKELGLNPEKVNIDGGAIA
LGHPLGASGCRILVTLLHTLERVGGTRGVAALCIGGGMGVAMCVQRG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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