NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS84186.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84186.1 Public Mus musculus 15 Fbln1 23 108 98 CCDS HistoryNCBI Gene:14114Re-query CCDS DB by CCDS ID:84186.1Re-query CCDS DB by GeneID:14114See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84186.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109432.3 ENSMUSP00000105058.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109432.3Link to Ensembl Protein Viewer:ENSMUSP00000105058.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000109432Re-query CCDS DB by Protein ID:ENSMUSP00000105058
Original member Current member NCBI NM_001347088.1 NP_001334017.1 Accepted alive Link to Nucleotide Sequence:NM_001347088.1Link to Protein Sequence:NP_001334017.1Re-query CCDS DB by Nucleotide ID:NM_001347088Re-query CCDS DB by Protein ID:NP_001334017Link to BLAST:NP_001334017.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334017.1 685 Q08879-2 685 100% 0 0

Chromosomal Locations for CCDS 84186.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 85206134 85206212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85221904 85222009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85224250 85224385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85226968 85227139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85229560 85229616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85230799 85230900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85231417 85231554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85232539 85232676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85237608 85237751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85238463 85238591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85239294 85239419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85240620 85240739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85242011 85242142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85244183 85244306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85251445 85251799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2058 nt):
ATGGAGCGCCCCGTGCCGTCGCGCCTCGTCCCGCTGCCGCTGCTGCTGCTCAGCAGCCTCTCGCTGCTGG
CAGCCCGAGCGAATGCAGACATCTCCATGGAGGCTTGCTGCACGGATGGAAATCAGATGGCTAACCAGCA
CAGGGACTGCTCGCTGCCGTACACCTCAGAATCCAAGGAGTGCAGGATGGTCCAGGAGCAATGTTGTCAC
AACCAACTGGAAGAGCTGCACTGTGCCACGGGCATCAACCTGGCCAGCGAGCCAGAAGGCTGCGCCTCGC
TCCACAGCTACAACAGTAGCCTTGAGACCATCTTCATAAAGAGGTGCTGCCACTGTTGCATGCTGGGAAA
GGCATCCCTGGCCCGAGACCAGACCTGTGAACCCATTGTCATGATAAGCTACCAGTGTGGGCTGGTGTTC
CGTGCCTGCTGTGTGAAGGCCCGGGAGAATTCAGACTTTGTCCAAGGCAACGGTGCAGACCTTCAGGACC
CAGCTAAGATTCCTGACGAGGAGGACCAAGAAGACCCGTACCTGAATGACCGCTGTCGAGGTGGCGGGCC
CTGTAAGCAGCAGTGCCGTGACACTGGGGACGAGGTGATCTGCTCTTGCTTTGTGGGCTACCAGCTGCAG
TCGGATGGTGTCTCCTGCGAAGATATCAATGAATGCATCACAGGCAGCCATAACTGCCGGCTGGGAGAAT
CCTGCATCAATACAGTGGGCTCTTTCCGCTGCCAGCGGGACAGCAGCTGTGGGACTGGCTATGAGCTCAC
AGAGGATAATAACTGCAAAGATATTGACGAATGTGAGACTGGTATTCATAACTGCCCCCCCGATTTTATC
TGTCAGAATACTCTGGGATCCTTCCGTTGCAGACCGAAGCTGCAGTGCAAGAGCGGCTTCATACAGGATG
CTCTAGGCAACTGCATTGATATCAATGAGTGTTTAAGTATCAGTGCTCCATGCCCTGTGGGGCAGACATG
CATCAATACAGAGGGCTCCTACACATGCCAGAAGAATGTGCCCAACTGTGGCCGTGGTTATCATCTCAAT
GAAGAGGGGACCCGCTGTGTTGATGTGGATGAGTGCTCCCCACCAGCGGAGCCCTGTGGGAAGGGACACC
ACTGCCTGAACTCCCCCGGCAGCTTCCGCTGCGAGTGCAAGGCTGGCTTCTATTTTGATGGCATCAGCAG
GACCTGCGTGGATATCAACGAGTGCCAGCGCTATCCCGGGCGCCTGTGTGGCCACAAGTGTGAGAACACG
CCAGGCTCCTTCCACTGCAGCTGCTCCGCCGGCTTCCGGCTGTCTGTGGACGGCCGGTCTTGTGAAGATG
TGAACGAGTGTCTCAACAGCCCTTGCAGCCAGGAGTGTGCTAATGTCTATGGCTCCTACCAGTGCTATTG
CCGACGAGGTTACCAGCTCAGTGACGTGGATGGGGTCACCTGCGAAGATATTGATGAGTGTGCCCTGCCC
ACTGGAGGTCACATCTGCTCCTACCGCTGCATCAACATCCCCGGAAGCTTCCAGTGCAGCTGCCCCTCAT
CTGGCTACAGGCTAGCTCCCAATGGCCGCAACTGCCAAGACATTGATGAGTGTGTGACCGGCATCCATAA
CTGTTCCATCAATGAGACTTGCTTCAACATCCAGGGCAGCTTCCGCTGTCTGTCCTTTGAATGCCCCGAG
AACTATCGCCGCTCCGCAGACACCCGCTGTGAGCGCTTGCCTTGCCATGAGAACCAGGAGTGCCCCAGGC
TGCCTCTGAGAATAACCTACTACCACCTCTCTTTTCCCACCAACATCCAAGTGCCAGCGGTGGTTTTCCG
CATGGGCCCTTCCAGTGCTGTCCCTGGGGACAGCATGCAGCTGGCCATCACCGCTGGCAATGAGGAGGGC
TTTTTCACCACTCGAAAGGTGAGCCACCACAGTGGGGTGGTGGCCCTCACCAAACCCATCCCTGAGCCCA
GGGACTTGCTCCTGACCGTCAAGATGGATCTTTATCGCCACGGCACAGTCAGCTCCTTTGTGGCCAAGCT
TTTCATCTTTGTGTCTGCAGAGCTCTGA

Translation (685 aa):
MERPVPSRLVPLPLLLLSSLSLLAARANADISMEACCTDGNQMANQHRDCSLPYTSESKECRMVQEQCCH
NQLEELHCATGINLASEPEGCASLHSYNSSLETIFIKRCCHCCMLGKASLARDQTCEPIVMISYQCGLVF
RACCVKARENSDFVQGNGADLQDPAKIPDEEDQEDPYLNDRCRGGGPCKQQCRDTGDEVICSCFVGYQLQ
SDGVSCEDINECITGSHNCRLGESCINTVGSFRCQRDSSCGTGYELTEDNNCKDIDECETGIHNCPPDFI
CQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAPCPVGQTCINTEGSYTCQKNVPNCGRGYHLN
EEGTRCVDVDECSPPAEPCGKGHHCLNSPGSFRCECKAGFYFDGISRTCVDINECQRYPGRLCGHKCENT
PGSFHCSCSAGFRLSVDGRSCEDVNECLNSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALP
TGGHICSYRCINIPGSFQCSCPSSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGSFRCLSFECPE
NYRRSADTRCERLPCHENQECPRLPLRITYYHLSFPTNIQVPAVVFRMGPSSAVPGDSMQLAITAGNEEG
FFTTRKVSHHSGVVALTKPIPEPRDLLLTVKMDLYRHGTVSSFVAKLFIFVSAEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH