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Report for CCDS9091.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9091.1 Public Homo sapiens 12 IGF1 24 110 108 CCDS HistoryNCBI Gene:3479Re-query CCDS DB by CCDS ID:9091.1Re-query CCDS DB by GeneID:3479See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9091.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337514.11 ENSP00000337612.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337514.11Link to Ensembl Protein Viewer:ENSP00000337612.7Re-query CCDS DB by Nucleotide ID:ENST00000337514Re-query CCDS DB by Protein ID:ENSP00000337612
Original member Current member EBI ENST00000644491.1 ENSP00000494228.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644491.1Link to Ensembl Protein Viewer:ENSP00000494228.1Re-query CCDS DB by Nucleotide ID:ENST00000644491Re-query CCDS DB by Protein ID:ENSP00000494228
Original member Current member NCBI NM_000618.5 NP_000609.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000618.5Link to Protein Sequence:NP_000609.1Re-query CCDS DB by Nucleotide ID:NM_000618Re-query CCDS DB by Protein ID:NP_000609Link to BLAST:NP_000609.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000609.1 153 P05019-2 153 100% 0 0

Chromosomal Locations for CCDS 9091.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 102402507 102402566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102419509 102419690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102475643 102475799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102480319 102480381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGGGAAAAATCAGCAGTCTTCCAACCCAATTATTTAAGTGCTGCTTTTGTGATTTCTTGAAGGTGAAGA
TGCACACCATGTCCTCCTCGCATCTCTTCTACCTGGCGCTGTGCCTGCTCACCTTCACCAGCTCTGCCAC
GGCTGGACCGGAGACGCTCTGCGGGGCTGAGCTGGTGGATGCTCTTCAGTTCGTGTGTGGAGACAGGGGC
TTTTATTTCAACAAGCCCACAGGGTATGGCTCCAGCAGTCGGAGGGCGCCTCAGACAGGCATCGTGGATG
AGTGCTGCTTCCGGAGCTGTGATCTAAGGAGGCTGGAGATGTATTGCGCACCCCTCAAGCCTGCCAAGTC
AGCTCGCTCTGTCCGTGCCCAGCGCCACACCGACATGCCCAAGACCCAGAAGGAAGTACATTTGAAGAAC
GCAAGTAGAGGGAGTGCAGGAAACAAGAACTACAGGATGTAG

Translation (153 aa):
MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVDALQFVCGDRG
FYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARSVRAQRHTDMPKTQKEVHLKN
ASRGSAGNKNYRM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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