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Report for CCDS41555.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41555.1 Public Homo sapiens 10 CC2D2B 24 110 108 CCDS HistoryNCBI Gene:387707Re-query CCDS DB by CCDS ID:41555.1Re-query CCDS DB by GeneID:387707See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41555.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344386.3 ENSP00000343747.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344386.3Link to Ensembl Protein Viewer:ENSP00000343747.3Re-query CCDS DB by Nucleotide ID:ENST00000344386Re-query CCDS DB by Protein ID:ENSP00000343747
Original member Current member NCBI NM_001001732.4 NP_001001732.2 Accepted alive Link to Nucleotide Sequence:NM_001001732.4Link to Protein Sequence:NP_001001732.2Re-query CCDS DB by Nucleotide ID:NM_001001732Re-query CCDS DB by Protein ID:NP_001001732Link to BLAST:NP_001001732.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001732.2 322 Q6DHV5-1 322 100% 0 0

Chromosomal Locations for CCDS 41555.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 96004228 96004248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96009825 96009923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96012532 96012729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96013788 96013877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96016201 96016314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96019203 96019337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96019702 96019824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96031820 96032008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGATGACTGAAAAACATGAGGATCACTGTCTCAAGAGCTGTAGTGGTCACTCATATATAAGAAAGAATT
GGCTTGGATGCATTGTCTTCCCTTTTTCTGCTCTTCTGCAACAATCTGAGTTTTTAGATCAAACAGAGGT
CTTGCAGAGAGCACAGATTTTTAAAAAGAATTGTAAGGCAATGTTTCCCAACCGAAGAATCGTAACTACT
GTTTTTAATGATGAAGGGATACAGTTCTTAGTCACAAGATATATCAAGGCATTAAATCCACCTCAGCAAC
TTCTGGATATATTTCTTCACAATTCTAATGCAACATTTGACCTCATTGCTCGATTTGTATCTTTGATTCC
TTTTGTGCCTAATACACCAGATGAAAATGATGGCTCTGATATATGGATGACATCAGAGCACTGCATCAGT
TTAGCTATCGGAAATAAGGAGGAGCATGCCATCCTTCTCTGTAATTTCTTTCTGTATTTTGGAAAGAAGG
CACTGGTCCTCTTGGGAACGTCAGTGTTAGAAGGGCATGTGGCTTATGTAGTAACTCAAGAAACTAATGA
ATATTTGCTTTGGAATCCATCAACTGGCCAATGTTATAAGCAGTTTGACCCGTTTTGTCCCTTAAAAAGT
GTAGATTGTTTGTTTGATGATAGAAATGTCTGGTTTAATATTCAACAAAATAATACACCAATGGCTGTAT
TTTTTGACTATTCAAAGGAAAGTTTCTGGAAGCAGTTGCTTCCAAAAAACGTTCAAGGAACAAAAATACA
AAGCATACAGGTCACGGGATTTCCCATCCAGATGCCATACATTGATGTACAGTCAATTATTGATGCTGTT
TATCAAACTGGAATTCACTCTGCTGAATTTCCCCAGACAGAATTTGCTTTAGCTGTATACATTCACCCAT
ACCCAAACAACATATTATCTGTGTGGGTCTATTTGGCTTCCTTAGTTCAACATCAATGA

Translation (322 aa):
MMTEKHEDHCLKSCSGHSYIRKNWLGCIVFPFSALLQQSEFLDQTEVLQRAQIFKKNCKAMFPNRRIVTT
VFNDEGIQFLVTRYIKALNPPQQLLDIFLHNSNATFDLIARFVSLIPFVPNTPDENDGSDIWMTSEHCIS
LAIGNKEEHAILLCNFFLYFGKKALVLLGTSVLEGHVAYVVTQETNEYLLWNPSTGQCYKQFDPFCPLKS
VDCLFDDRNVWFNIQQNNTPMAVFFDYSKESFWKQLLPKNVQGTKIQSIQVTGFPIQMPYIDVQSIIDAV
YQTGIHSAEFPQTEFALAVYIHPYPNNILSVWVYLASLVQHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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