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Report for CCDS36855.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36855.1 Public Mus musculus 14 Sh3bp5 23 108 98 CCDS HistoryNCBI Gene:24056Re-query CCDS DB by CCDS ID:36855.1Re-query CCDS DB by GeneID:24056See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36855.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091903.4 ENSMUSP00000089517.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091903.4Link to Ensembl Protein Viewer:ENSMUSP00000089517.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000091903Re-query CCDS DB by Protein ID:ENSMUSP00000089517
Original member NCBI NM_011894.3 NP_036024.2 Updated not alive Link to Nucleotide Sequence:NM_011894.3Link to Protein Sequence:NP_036024.2Re-query CCDS DB by Nucleotide ID:NM_011894Re-query CCDS DB by Protein ID:NP_036024
Current member NCBI NM_011894.4 NP_036024.2 Accepted alive Link to Nucleotide Sequence:NM_011894.4Link to Protein Sequence:NP_036024.2Re-query CCDS DB by Nucleotide ID:NM_011894Re-query CCDS DB by Protein ID:NP_036024Link to BLAST:NP_036024.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036024.2 458 Q9Z131-2 458 100% 0 0

Chromosomal Locations for CCDS 36855.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 31374984 31375201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31375604 31375864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31377391 31377610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31378278 31378320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31379389 31379519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31387719 31387883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31411541 31411669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31434083 31434145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31435811 31435957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1377 nt):
ATGGACACGGCGCTGAAACGGAGCCGCTCTGACGAGCCGGCGGAGCTCCCGCCGCCTGCCCGGGAGGTGG
AGGAGAAAGAGGAGGAGGAAGAGAGGATGGAACAGGGCCTGGAGGAGGAGGAGGAAGAGGTGGACCCCCG
GATCCAGGGAGAACTGGAGAAGTTAAATCAATCCACGGATGATATCAACCGACGGGAGACTGAGCTTGAG
GATGCACGCCAGAAGTTCCGATCTGTCCTGGTCGAGGCAACGGTGAAACTAGACGAACTGGCAAAGAAAA
TCGGCAAAGCCGTGGAGGACTCGAAGCCCTACTGGGAGGCCCGGAGGGTGGCAAGGCAGGCTCAGCTGGA
GGCGCAGAAGGCCACACAGGACTTCCAGAGGGCCACCGAGGTACTCCGTGCAGCCAAGGAAACAATCTCT
CTGGCTGAGCAGCGGCTGTTGGAGGATGACAAGCGGCAGTTTGACTCTGCTTGGCAGGAAATGCTGAACC
ATGCTACTCAGAGGGTCATGGAGGCCGAGCAGACCAAGACAAGGAGTGAGCTAGTACACAAGGAGACGGC
AGCCAGGTACAACGCTGCCATGGGTCGCATGCGCCAGCTGGAGAAGAAACTCAAGCGAGCCATCAACAAG
TCCAAGCCTTATTTTGAGCTAAAGGCAAAGTACTACGTGCAGCTTGAGCAACTGAAGAAGACGGTGGATG
ACCTTCAGGCCAAGCTGGCCCTGGCAAAGGGCGAGTACAAGGCAGCCCTGAAGAGCCTGGAGAGGATCTC
AGATGAGATACACGAGCGGCGGCGTTCCAATGCCATGGGGCCCCGGGGCTGTGGCGTGGGGGCAGAGGGC
AGCATCGCCTCAGTGGAGAACCTGCCTGTAAGCAAACCTGAGCCTGACGCCATTTCTGTGGCATCAGAAG
CCTTTGAAGATGACAACTGCAGCAACTTGGTGTCTGAAGATGACTCGGAAACCCAGTCTGTGTCCAGCTT
TAGTTCGGGACCGACGAGTCCGTCTGAAATGCCTGATCAGTTCCCTGCAGTGGCAAGGCCTGGCAGTCTG
GATCTGCCTAGCCCTGTGTCCCTGTCAGAATTTGGGATGATGTTCCCAATACTGGGTCCTCGAAGTGAAT
GCAGTGGGGCCTCCTCCCCTGAATGTGAGGTTGAACGAGGAGACAGAGCAGAAGGGGCCGAGAATAAAAT
GAGTGACAAAGCCAACAACAACCGTGTTCTCGGCAGCACCAACGGTGGCAGTGGCAGGAGCAGGAGCCAA
AGCAGCACGTCCCTTGAGAGCCAGGCCTTGGAAACCCGGATGAAGCAGCTCTCCCTACAGTGCTCAAAAG
GAAGAGATGGAATTATTGCTGACATAAAAATGGTGCAGATTGGCTGA

Translation (458 aa):
MDTALKRSRSDEPAELPPPAREVEEKEEEEERMEQGLEEEEEEVDPRIQGELEKLNQSTDDINRRETELE
DARQKFRSVLVEATVKLDELAKKIGKAVEDSKPYWEARRVARQAQLEAQKATQDFQRATEVLRAAKETIS
LAEQRLLEDDKRQFDSAWQEMLNHATQRVMEAEQTKTRSELVHKETAARYNAAMGRMRQLEKKLKRAINK
SKPYFELKAKYYVQLEQLKKTVDDLQAKLALAKGEYKAALKSLERISDEIHERRRSNAMGPRGCGVGAEG
SIASVENLPVSKPEPDAISVASEAFEDDNCSNLVSEDDSETQSVSSFSSGPTSPSEMPDQFPAVARPGSL
DLPSPVSLSEFGMMFPILGPRSECSGASSPECEVERGDRAEGAENKMSDKANNNRVLGSTNGGSGRSRSQ
SSTSLESQALETRMKQLSLQCSKGRDGIIADIKMVQIG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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