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Report for CCDS27856.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27856.1 Public Mus musculus 15 Krt75 23 108 98 CCDS HistoryNCBI Gene:109052Re-query CCDS DB by CCDS ID:27856.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27856.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042957.5 ENSMUSP00000036246.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042957.5Link to Ensembl Protein Viewer:ENSMUSP00000036246.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000042957Re-query CCDS DB by Protein ID:ENSMUSP00000036246
Original member Current member NCBI NM_133357.3 NP_579935.1 Accepted alive Link to Nucleotide Sequence:NM_133357.3Link to Protein Sequence:NP_579935.1Re-query CCDS DB by Nucleotide ID:NM_133357Re-query CCDS DB by Protein ID:NP_579935Link to BLAST:NP_579935.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_579935.1 551 Q8BGZ7 551 100% 0 0

Chromosomal Locations for CCDS 27856.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101564882 101565117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101566240 101566274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101567944 101568164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101568289 101568414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101570160 101570324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101571021 101571116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101571644 101571704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101572622 101572836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101573331 101573831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1656 nt):
ATGTCCCGGCAATCCACCATCACCTTCCACTCCGGCAGCCGCAGGGGCTTCAGCACAGCCTCAGCCACCA
CACCTACGGCTGGACGCTCCCGCTTCAGCTCCGTGTCTGTGGCCCGCTCCTCAGGAAACAGTGGGGGACT
GGGCAGGATCAGTGGTATTGGTTCTGGCTTTGGAAGCCGCAGCCTCTACAACCTAGGGGGGACCCGGCGG
GTCTCCATTGGTGGCTGTGCTGGCAGTGGCTTCAGGGGTGGCTTTGGTGGCAGGACTAGCAGTGGCTTTG
GGGGCAGCAGTGGCTTTGCTTATGGAGGTGGCATTGGAGGGGGCTTTGGTGGCCCTGGCTTCTCTGTCTG
TCCCTCTGGAGGCATTCAGGAAGTTACTGTCAACCAGAGCCTCCTGACTCCCCTCAACCTGCAAATCGAC
CCCACTATCCAGCGGGTGCGGAAAGAAGAACGGGAGCAGATCAAGACTCTGAACAACAAGTTCGCCTCCT
TCATTGACAAGGTACGCTTCCTGGAGCAGCAGAACAAGGTCCTGGAGACCAAGTGGAATCTCCTGCAGGA
GCAGGGCTCTAGGACAGTCAGACAGAACCTGGAGCCTTTCTTCGATACATATGTCAATGACCTCCGCCGG
CAGCTGGATGGCATCACAGCTGAAAGAGGCAGACTGGATGCTGAACTGAGGAACATGCAGGAGGTTGTAG
AAGACTTCAAAGTCAGGTATGAAGACGAAATTAACAAGCGTGCGGCTGCCGAGAATGAGTTCGTGGGCCT
GAAAAAGGACGTAGACAGTGCCTACATGAACAAGGTGGAGCTGGAAGCGAAGGTCGACTCTCTGACTGAC
CAGATCAACTTCTACCGGATGATCTATGAGGCAGAGCTGTCTCAGATGCAGAACCAGGTGAGTGACACCT
CTGTGGTCCTCTCCATGGACAACAACCGCAGCCTGGACCTGGACAGCATCATCGCCGAGGTCAAGGCCCA
GTACGAGGACATTGCCAACCGAAGCCGGGCAGAGGCTGAGTCCTGGTACCAGACGAAGTATGAGGAGCTG
CAGGTGACCGCAGGCCGGCATGGTGATGACCTCCGCAACACCAAACAAGAGATTTCAGAGATGAACCGGA
TGATCCAGAGGCTCAGATCTGAGATTGATGCCGTCAAGAAGCAGTGCTCCAGCTTACAAACTGCTATCTC
TGACGCTGAGCAGCGTGGAGAGCTAGCTCTCAAGGATGCCCGGGCCAAGCTGATGGAGCTTGAAGATGCC
CTACAGAAAGCCAAGCAGGACATGGCCAGGTTGCTTCGAGAGTACCAGGAACTCATGAACGTCAAACTGG
CCTTGGATGTGGAGATCGCCACCTACAGGAAGCTGCTGGAAGGCGAGGAGTGCAGGCTGAGCGGAGAGGG
AGTTTCCCCAGTGAACATCTCTGTGGTCACTTCTACGGTTTCCAGTGGCTATGGCGGTGGTGCCAACATT
GGAGGTGGAAGCCTGGGTCTTGGTGGGAACAGTGGCTACTCCTTCACGACCAGTGGTGGGCACAGCCTGG
GCACAGGTCTGGGAGGCTCTGGCTTTACCACCACCAGCAGCCGGGGCCCAGTGGGCAGTGGCTCCAGCAT
CAAGTTTGTCTCCAGCACATCATCCAGAAAGAGTTACAAGCACTGA

Translation (551 aa):
MSRQSTITFHSGSRRGFSTASATTPTAGRSRFSSVSVARSSGNSGGLGRISGIGSGFGSRSLYNLGGTRR
VSIGGCAGSGFRGGFGGRTSSGFGGSSGFAYGGGIGGGFGGPGFSVCPSGGIQEVTVNQSLLTPLNLQID
PTIQRVRKEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWNLLQEQGSRTVRQNLEPFFDTYVNDLRR
QLDGITAERGRLDAELRNMQEVVEDFKVRYEDEINKRAAAENEFVGLKKDVDSAYMNKVELEAKVDSLTD
QINFYRMIYEAELSQMQNQVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEEL
QVTAGRHGDDLRNTKQEISEMNRMIQRLRSEIDAVKKQCSSLQTAISDAEQRGELALKDARAKLMELEDA
LQKAKQDMARLLREYQELMNVKLALDVEIATYRKLLEGEECRLSGEGVSPVNISVVTSTVSSGYGGGANI
GGGSLGLGGNSGYSFTTSGGHSLGTGLGGSGFTTTSSRGPVGSGSSIKFVSSTSSRKSYKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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