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Report for CCDS9291.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9291.1 Public Homo sapiens 13 GJB6 24 110 108 CCDS HistoryNCBI Gene:10804Re-query CCDS DB by CCDS ID:9291.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9291.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000241124.11 ENSP00000241124.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000241124.11Link to Ensembl Protein Viewer:ENSP00000241124.6Re-query CCDS DB by Nucleotide ID:ENST00000241124Re-query CCDS DB by Protein ID:ENSP00000241124
Original member Current member EBI ENST00000400065.7 ENSP00000382938.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400065.7Link to Ensembl Protein Viewer:ENSP00000382938.3Re-query CCDS DB by Nucleotide ID:ENST00000400065Re-query CCDS DB by Protein ID:ENSP00000382938
Original member Current member EBI ENST00000400066.8 ENSP00000382939.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400066.8Link to Ensembl Protein Viewer:ENSP00000382939.3Re-query CCDS DB by Nucleotide ID:ENST00000400066Re-query CCDS DB by Protein ID:ENSP00000382939
Original member Current member EBI ENST00000636852.1 ENSP00000489698.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636852.1Link to Ensembl Protein Viewer:ENSP00000489698.1Re-query CCDS DB by Nucleotide ID:ENST00000636852Re-query CCDS DB by Protein ID:ENSP00000489698
Original member Current member EBI ENST00000644667.1 ENSP00000493621.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644667.1Link to Ensembl Protein Viewer:ENSP00000493621.1Re-query CCDS DB by Nucleotide ID:ENST00000644667Re-query CCDS DB by Protein ID:ENSP00000493621
Original member Current member EBI ENST00000647029.1 ENSP00000493834.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000647029.1Link to Ensembl Protein Viewer:ENSP00000493834.1Re-query CCDS DB by Nucleotide ID:ENST00000647029Re-query CCDS DB by Protein ID:ENSP00000493834
Original member Current member EBI ENST00000643121.1 ENSP00000494468.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643121.1Link to Ensembl Protein Viewer:ENSP00000494468.1Re-query CCDS DB by Nucleotide ID:ENST00000643121Re-query CCDS DB by Protein ID:ENSP00000494468
Original member Current member EBI ENST00000647243.1 ENSP00000494733.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647243.1Link to Ensembl Protein Viewer:ENSP00000494733.1Re-query CCDS DB by Nucleotide ID:ENST00000647243Re-query CCDS DB by Protein ID:ENSP00000494733
Original member Current member EBI ENST00000644283.1 ENSP00000495320.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644283.1Link to Ensembl Protein Viewer:ENSP00000495320.1Re-query CCDS DB by Nucleotide ID:ENST00000644283Re-query CCDS DB by Protein ID:ENSP00000495320
Original member Current member EBI ENST00000643211.1 ENSP00000495841.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643211.1Link to Ensembl Protein Viewer:ENSP00000495841.1Re-query CCDS DB by Nucleotide ID:ENST00000643211Re-query CCDS DB by Protein ID:ENSP00000495841
Original member Current member NCBI NM_001110219.3 NP_001103689.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001110219.3Link to Protein Sequence:NP_001103689.1Re-query CCDS DB by Nucleotide ID:NM_001110219Re-query CCDS DB by Protein ID:NP_001103689Link to BLAST:NP_001103689.1
Original member Current member NCBI NM_001110220.3 NP_001103690.1 Accepted alive Link to Nucleotide Sequence:NM_001110220.3Link to Protein Sequence:NP_001103690.1Re-query CCDS DB by Nucleotide ID:NM_001110220Re-query CCDS DB by Protein ID:NP_001103690Link to BLAST:NP_001103690.1
Original member Current member NCBI NM_001110221.3 NP_001103691.1 Accepted alive Link to Nucleotide Sequence:NM_001110221.3Link to Protein Sequence:NP_001103691.1Re-query CCDS DB by Nucleotide ID:NM_001110221Re-query CCDS DB by Protein ID:NP_001103691Link to BLAST:NP_001103691.1
Original member Current member NCBI NM_001370090.1 NP_001357019.1 Accepted alive Link to Nucleotide Sequence:NM_001370090.1Link to Protein Sequence:NP_001357019.1Re-query CCDS DB by Nucleotide ID:NM_001370090Re-query CCDS DB by Protein ID:NP_001357019Link to BLAST:NP_001357019.1
Original member Current member NCBI NM_001370091.1 NP_001357020.1 Accepted alive Link to Nucleotide Sequence:NM_001370091.1Link to Protein Sequence:NP_001357020.1Re-query CCDS DB by Nucleotide ID:NM_001370091Re-query CCDS DB by Protein ID:NP_001357020Link to BLAST:NP_001357020.1
Original member Current member NCBI NM_001370092.1 NP_001357021.1 Accepted alive Link to Nucleotide Sequence:NM_001370092.1Link to Protein Sequence:NP_001357021.1Re-query CCDS DB by Nucleotide ID:NM_001370092Re-query CCDS DB by Protein ID:NP_001357021Link to BLAST:NP_001357021.1
Original member Current member NCBI NM_006783.5 NP_006774.2 Accepted alive Link to Nucleotide Sequence:NM_006783.5Link to Protein Sequence:NP_006774.2Re-query CCDS DB by Nucleotide ID:NM_006783Re-query CCDS DB by Protein ID:NP_006774Link to BLAST:NP_006774.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001103689.1 261 O95452 261 100% 0 0
NP_001103690.1 261 O95452 261 100% 0 0
NP_001103691.1 261 O95452 261 100% 0 0
NP_001357019.1 261 O95452 261 100% 0 0
NP_001357020.1 261 O95452 261 100% 0 0
NP_001357021.1 261 O95452 261 100% 0 0
NP_006774.2 261 O95452 261 100% 0 0

Chromosomal Locations for CCDS 9291.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 20222695 20223480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGGATTGGGGGACGCTGCACACTTTCATCGGGGGTGTCAACAAACACTCCACCAGCATCGGGAAGGTGT
GGATCACAGTCATCTTTATTTTCCGAGTCATGATCCTCGTGGTGGCTGCCCAGGAAGTGTGGGGTGACGA
GCAAGAGGACTTCGTCTGCAACACACTGCAACCGGGATGCAAAAATGTGTGCTATGACCACTTTTTCCCG
GTGTCCCACATCCGGCTGTGGGCCCTCCAGCTGATCTTCGTCTCCACCCCAGCGCTGCTGGTGGCCATGC
ATGTGGCCTACTACAGGCACGAAACCACTCGCAAGTTCAGGCGAGGAGAGAAGAGGAATGATTTCAAAGA
CATAGAGGACATTAAAAAGCAGAAGGTTCGGATAGAGGGGTCGCTGTGGTGGACGTACACCAGCAGCATC
TTTTTCCGAATCATCTTTGAAGCAGCCTTTATGTATGTGTTTTACTTCCTTTACAATGGGTACCACCTGC
CCTGGGTGTTGAAATGTGGGATTGACCCCTGCCCCAACCTTGTTGACTGCTTTATTTCTAGGCCAACAGA
GAAGACCGTGTTTACCATTTTTATGATTTCTGCGTCTGTGATTTGCATGCTGCTTAACGTGGCAGAGTTG
TGCTACCTGCTGCTGAAAGTGTGTTTTAGGAGATCAAAGAGAGCACAGACGCAAAAAAATCACCCCAATC
ATGCCCTAAAGGAGAGTAAGCAGAATGAAATGAATGAGCTGATTTCAGATAGTGGTCAAAATGCAATCAC
AGGTTTCCCAAGCTAA

Translation (261 aa):
MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFP
VSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIEDIKKQKVRIEGSLWWTYTSSI
FFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAEL
CYLLLKVCFRRSKRAQTQKNHPNHALKESKQNEMNELISDSGQNAITGFPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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