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Report for CCDS50303.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
50303.1 |
Public |
Mus musculus |
18 |
Afap1l1 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 50303.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000120472.1 |
ENSMUSP00000113286.1 |
Accepted |
alive |
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NCBI |
NM_178928.4 |
NP_849259.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_849259.2 |
768 |
Q8BZI0-1 |
768 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 50303.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2307 nt): ATGGACCGAAGCAGGGTGCTGGAACAGCTAATCCCAGAGCTCACCGGACTCCTCAGCCTCCTGGACCATG AGTATCTCAGCGACAGCACCCTGGAGAAGAAGATGGCTGTGGCCTCCCTCCTGCAGAGCCTGCAGCCCCT CCCAGCAAAGGAAGTCTCTTTCCTGTATGTGAACACTGCAGACCTGCACTCGGGGCCCAGCTTTGTGGAG TCTCTCTTTGAAGAATTCGACTGTGACCTGGGTGACCTTCGGGATATGTCGGACGATGGGGAACCCAGCA AAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTGATGTGCCTCCACCCTT GCCCAACAAGCCCCCGCCCGAGGACTACTATGAAGAAGCCCTTCCCCTGGGGCCCGGCAAGTCCCCCGAG TATATCAGCTCTCACAATGGCTGCAGCCCTGCACAGTCGATTGTGGACGGTTACTACGAGGACGCAGACA ACAGCTACCCCACCACAAGGATGAATGGAGAACTGAAGAACTCCTACAATGACTCTGACGCCATGAGTAG CTCCTATGAATCCTACGACGAGGAGGAGGAGGAAGAGAAGGGGCGGCAGCCCAAGCACCAGTGGCCCTCG GAAGAGGCCTCCATGCACCTGGTTAGGGACTGCAGGATATGTGCCTTCCTGCTTCGGAAAAAGCGCTTCG GGCAGTGGGCCAAGCAGCTGACGGTCATCAAGGAGGAGCAGCTACTGTGTTACAAAAGCTCCAAGGACCG ACAGCCACACCTGAGGCTGGCGCTAGACGTCTGCACTGTCATCTATGTGCCCAAGGACAGCAGGCACAAG CGGCACGAGCTGCGCTTCTCCCAGGGGGCCACAGAGGTGTTAGTGCTGGCTCTGCAGAGCAGGGAGCAGG CCGAGGAGTGGCTGAAGGTCATCCGAGAGGTCAGCCGGCCCATTGTGGGAGCAGAGGGCTTGGAGGTCCC CAGATCCCCAGTCATCCTATGCAAGGCGGATCAGGACAAGAGGTTGTCCCAAGAGAAACAGAACTCAGAC TCCGACAGCCTGGGCATGAATGACAGTGGTTCCACTCTCGGCCGTCGAGAAGCCTGTGAACATGGCAAAG GGAAGAAGAACAGCCTGGCTGAGCTTAAGGGCTCCATGAGCAGGGCTGCCGGCCGCAAGATCACGCGCAT CATCAGTTTCTCCAAGAAGAAGGCGCTGTCCGAGGACCTGCAGACATTCTCCAGTGAGGACGAGGTTCCA TGCTGTGGCTACCTGAATGTGCTGGTAAACCAAGGCTGGAAGGAACGGTGGTGTCGCCTCAGGTGCAACA CTCTCTATTTCCACAAAGACCGCACAGACCTGCACACCCACGTGAATTCCATAGCCCTCAGGGGCTGCGA GGTAGCCCCAGGCTTTGGACCCAGGCACCCCTTTGCCTTCAGGATCCTGCGCAATCGACAGGAGGTGGCC ATCCTGGAGGCAAGCTGCTCAGAGGACATGGGCCGCTGGCTCGGTCTGCTGCTAGTGGAGATGGGCTCCA AAGTCACCCCAGAGGCACTGCACTATGACTACGTCGACGTGGAGACCTTAACCAGCATCGTCAGTGCTGG GCGCAACTCCTTCCTGTATGCACAGTCCTGCCAGGATCAGTGGCCTGAGCCCCGCATCTACGATGAGGTT CCTTATGAAAAGGTGCAGGATGAGGAGCCCCAGCGCCCCACCGGGGCTCAGGTGAAGCGCCACGCCTCCT CCTGCAGTGAGAAGTCCCACCGTGCGGACCCGCAGGTCAAAGTCAAGCGCCACGCCTCCAGTGCCAATCA ATACAAGTACGGCAAGAACCGGGCGGAGGAGGATGCCCGAAGGTACCTGGTAGAAAAAGAGAGGCTGGAG AAAGAGAAGGAAACGATTCGGACAGAACTGACGGCCTTGCGACAGGAGAAGAAAGAGCTGAAGGAAGCCA TTCGGAACAACCCAGGAGCAAAGTCGAAGGCCTTGGAAGAGGCCGTGGCCACTCTGGAAGCTCAATGCCG TGCCAAGGAAGAGCAGAGGATCGACCTGGAGCTCAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCC CTGGCCGGGGGTCCGGCCCTCGGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAAC CCCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAACTGAGAAAGAGGAGTCCATC CATTGTGACCTCCAACCAAGGGAGGGTGCTACAGAAGGCCAAGGAATGGGAAATGAAGAAGACCTAG
Translation (768 aa): MDRSRVLEQLIPELTGLLSLLDHEYLSDSTLEKKMAVASLLQSLQPLPAKEVSFLYVNTADLHSGPSFVE SLFEEFDCDLGDLRDMSDDGEPSKGASPEPTKSPSLRSAAADVPPPLPNKPPPEDYYEEALPLGPGKSPE YISSHNGCSPAQSIVDGYYEDADNSYPTTRMNGELKNSYNDSDAMSSSYESYDEEEEEEKGRQPKHQWPS EEASMHLVRDCRICAFLLRKKRFGQWAKQLTVIKEEQLLCYKSSKDRQPHLRLALDVCTVIYVPKDSRHK RHELRFSQGATEVLVLALQSREQAEEWLKVIREVSRPIVGAEGLEVPRSPVILCKADQDKRLSQEKQNSD SDSLGMNDSGSTLGRREACEHGKGKKNSLAELKGSMSRAAGRKITRIISFSKKKALSEDLQTFSSEDEVP CCGYLNVLVNQGWKERWCRLRCNTLYFHKDRTDLHTHVNSIALRGCEVAPGFGPRHPFAFRILRNRQEVA ILEASCSEDMGRWLGLLLVEMGSKVTPEALHYDYVDVETLTSIVSAGRNSFLYAQSCQDQWPEPRIYDEV PYEKVQDEEPQRPTGAQVKRHASSCSEKSHRADPQVKVKRHASSANQYKYGKNRAEEDARRYLVEKERLE KEKETIRTELTALRQEKKELKEAIRNNPGAKSKALEEAVATLEAQCRAKEEQRIDLELKLVAVKERLQQS LAGGPALGLSVSNKNKSQDTTNKPQSNAPEQSLPVNCVSELRKRSPSIVTSNQGRVLQKAKEWEMKKT
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