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Report for CCDS83319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83319.1 Public Homo sapiens 8 DERL1 24 110 108 CCDS HistoryNCBI Gene:79139Re-query CCDS DB by CCDS ID:83319.1Re-query CCDS DB by GeneID:79139See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83319.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523036.1 ENSP00000429199.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523036.1Link to Ensembl Protein Viewer:ENSP00000429199.1Re-query CCDS DB by Nucleotide ID:ENST00000523036Re-query CCDS DB by Protein ID:ENSP00000429199
Original member Current member EBI ENST00000519018.5 ENSP00000430086.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000519018.5Link to Ensembl Protein Viewer:ENSP00000430086.1Re-query CCDS DB by Nucleotide ID:ENST00000519018Re-query CCDS DB by Protein ID:ENSP00000430086
Original member Current member NCBI NM_001330601.2 NP_001317530.1 Accepted alive Link to Nucleotide Sequence:NM_001330601.2Link to Protein Sequence:NP_001317530.1Re-query CCDS DB by Nucleotide ID:NM_001330601Re-query CCDS DB by Protein ID:NP_001317530Link to BLAST:NP_001317530.1
Original member Current member NCBI NM_001363963.2 NP_001350892.1 Accepted alive Link to Nucleotide Sequence:NM_001363963.2Link to Protein Sequence:NP_001350892.1Re-query CCDS DB by Nucleotide ID:NM_001363963Re-query CCDS DB by Protein ID:NP_001350892Link to BLAST:NP_001350892.1

Chromosomal Locations for CCDS 83319.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 123015447 123015585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123019195 123019305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123021447 123021499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123022684 123022779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123023713 123023739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123024986 123025015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (456 nt):
ATGCTCCTCTTTAACTGGATTTGCATCGTGATTACTGGCTTAGCAATGGATATGCAGTTGCTGATGATTC
CTCTGATCATGTCAGTACTTTATGTCTGGGCCCAGCTGAACAGAGACATGATTGTATCATTTTGGTTTGG
AACACGATTTAAGGCCTGCTATTTACCCTGGGTTATCCTTGGATTCAACTATATCATCGGAGGCTCGGTA
ATCAATGAGCTTATTGGAAATCTGGTTGGACATCTTTATTTTTTCCTAATGTTCAGATACCCAATGGACT
TGGGAGGAAGAAATTTTCTATCCACACCTCAGTTTTTGTACCGCTGGCTGCCCAGTAGGAGAGGAGGAGT
ATCAGGATTTGGTGTGCCCCCTGCTAGCATGAGGCGAGCTGCTGATCAGAATGGCGGAGGCGGGAGACAC
AACTGGGGCCAGGGCTTTCGACTTGGAGACCAGTGA

Translation (151 aa):
MLLFNWICIVITGLAMDMQLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSV
INELIGNLVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRH
NWGQGFRLGDQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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