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Report for CCDS77378.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77378.1 Public Homo sapiens 2 MYT1L 24 110 108 CCDS HistoryNCBI Gene:23040Re-query CCDS DB by CCDS ID:77378.1Re-query CCDS DB by GeneID:23040See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77378.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428368.7 ENSP00000396103.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428368.7Link to Ensembl Protein Viewer:ENSP00000396103.3Re-query CCDS DB by Nucleotide ID:ENST00000428368Re-query CCDS DB by Protein ID:ENSP00000396103
Original member Current member EBI ENST00000647738.2 ENSP00000497479.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000647738.2Link to Ensembl Protein Viewer:ENSP00000497479.2Re-query CCDS DB by Nucleotide ID:ENST00000647738Re-query CCDS DB by Protein ID:ENSP00000497479
Original member Current member EBI ENST00000647694.1 ENSP00000497722.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647694.1Link to Ensembl Protein Viewer:ENSP00000497722.1Re-query CCDS DB by Nucleotide ID:ENST00000647694Re-query CCDS DB by Protein ID:ENSP00000497722
Original member Current member NCBI NM_001303052.2 NP_001289981.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001303052.2Link to Protein Sequence:NP_001289981.1Re-query CCDS DB by Nucleotide ID:NM_001303052Re-query CCDS DB by Protein ID:NP_001289981Link to BLAST:NP_001289981.1
Original member Current member NCBI NM_001329844.2 NP_001316773.1 Accepted alive Link to Nucleotide Sequence:NM_001329844.2Link to Protein Sequence:NP_001316773.1Re-query CCDS DB by Nucleotide ID:NM_001329844Re-query CCDS DB by Protein ID:NP_001316773Link to BLAST:NP_001316773.1
Original member Current member NCBI NM_001329845.1 NP_001316774.1 Accepted alive Link to Nucleotide Sequence:NM_001329845.1Link to Protein Sequence:NP_001316774.1Re-query CCDS DB by Nucleotide ID:NM_001329845Re-query CCDS DB by Protein ID:NP_001316774Link to BLAST:NP_001316774.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001289981.1 1186 Q9UL68-1 1186 100% 0 0
NP_001316773.1 1186 Q9UL68-1 1186 100% 0 0
NP_001316774.1 1186 Q9UL68-1 1186 100% 0 0

Chromosomal Locations for CCDS 77378.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 1791867 1792007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1792321 1792464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1801696 1801799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1809076 1809167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1839149 1839370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1840760 1840843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1851641 1851703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1886539 1886607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1887488 1887609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1889241 1889477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1892037 1892287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1903080 1903294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1910240 1910347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1912020 1912110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1917205 1917339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1922286 1923263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1942982 1943334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1979165 1979227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1979521 1979554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1979723 1979777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3561 nt):
ATGGAGGTGGACACCGAGGAGAAGCGGCATCGCACGCGGTCCAAAGGGGTTCGAGTTCCCGTGGAACCAG
CCATACAAGAGCTGTTCAGCTGTCCCACCCCTGGCTGTGACGGCAGTGGTCATGTCAGTGGCAAATATGC
AAGACACAGAAGTGTATATGGTTGTCCCTTGGCGAAAAAAAGAAAAACACAAGATAAACAGCCCCAGGAA
CCTGCTCCTAAACGAAAGCCATTTGCCGTGAAAGCAGACAGCTCCTCAGTGGATGAGTGTGACGACAGTG
ATGGGACTGAGGACATGGATGAGAAGGAGGAGGATGAGGGGGAGGAGTACTCCGAGGACAATGATGAGCC
AGGGGATGAGGACGAGGAGGACGAGGAGGGGGACCGGGAGGAGGAGGAGGAGATCGAGGAGGAGGATGAG
GACGATGACGAGGATGGAGAAGATGTGGAGGATGAAGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAG
AGGAAGAAGAAAACGAAGACCATCAAATGAATTGTCACAATACTCGAATAATGCAAGACACAGAAAAGGA
TGATAACAATAATGACGAATATGACAATTACGATGAACTGGTGGCCAAGTCATTGTTAAACCTCGGCAAA
ATCGCTGAGGATGCAGCCTACCGGGCCAGGACTGAGTCAGAAATGAACAGCAATACCTCCAATAGTCTGG
AAGACGATAGTGACAAAAACGAAAACCTGGGTCGGAAAAGTGAGTTGAGTTTAGACTTAGACAGTGATGT
TGTTAGAGAAACAGTGGACTCCCTTAAACTATTAGCCCAAGGACACGGTGTTGTGCTCTCAGAAAACATG
AATGACAGAAATTATGCAGACAGCATGTCGCAGCAAGACAGTAGAAATATGAATTACGTCATGTTGGGGA
AGCCCATGAACAACGGACTCATGGAAAAGATGGTGGAGGAGAGCGATGAGGAGGTGTGTCTGAGCAGTCT
GGAGTGTTTGAGGAATCAGTGCTTCGACCTGGCCAGGAAGCTCAGTGAGACCAACCCGCAGGAGAGGAAT
CCGCAGCAGAACATGAACATCCGTCAGCATGTCCGGCCAGAAGAGGACTTCCCCGGAAGGACGCCGGACA
GAAACTACTCGGACATGCTGAACCTCATGCGGCTGGAGGAGCAGTTGAGCCCCCGGTCGAGAGTGTTTGC
CAGCTGTGCGAAGGAGGATGGGTGTCATGAGCGGGACGACGATACCACCTCTGTGAACTCGGACAGGTCT
GAAGAGGTGTTCGACATGACCAAGGGGAACCTGACCCTGCTGGAGAAAGCCATCGCTTTGGAAACGGAAA
GAGCAAAGGCCATGAGGGAGAAGATGGCCATGGAAGCTGGGAGGAGGGACAATATGAGGTCATATGAGGA
CCAGTCTCCGAGACAACTTCCCGGGGAGGACAGAAAGCCTAAATCCAGTGACAGCCATGTCAAAAAGCCA
TACTATGGTAAAGATCCCTCAAGAACAGAAAAGAAAGAGAGCAAGTGTCCAACCCCCGGGTGTGATGGAA
CCGGCCACGTAACTGGGCTGTACCCACATCACCGCAGCCTGTCCGGATGCCCGCACAAAGATAGGGTCCC
TCCAGAAATCCTTGCCATGCATGAAAGTGTCCTCAAGTGCCCCACTCCGGGCTGCACGGGGCGCGGGCAT
GTCAACAGCAACAGGAACTCCCACCGAAGCCTCTCCGGATGCCCGATCGCTGCAGCAGAGAAACTGGCCA
AGGCACAGGAAAAGCACCAGAGCTGCGACGTGTCCAAGTCCAGCCAGGCCTCGGACCGCGTGCTCAGGCC
AATGTGCTTTGTGAAGCAGCTGGAGATTCCTCAGTATGGCTACAGAAACAATGTCCCCACAACTACGCCG
CGTTCCAACCTGGCCAAGGAGCTCGAGAAATATTCCAAGACCTCGTTTGAATACAACAGTTACGACAACC
ATACTTATGGCAAGCGAGCCATAGCTCCCAAGGTGCAAACCAGGGATATATCCCCCAAAGGATATGATGA
TGCGAAGCGGTACTGCAAGGACCCCAGCCCCAGCAGCAGCAGCACCAGCAGCTACGCGCCCAGCAGCAGC
AGCAACCTGAGCTGCGGCGGGGGCAGCAGCGCCAGCAGCACGTGCAGCAAGAGCAGCTTCGACTACACGC
ACGACATGGAGGCGGCCCACATGGCGGCCACCGCCATCCTCAACCTGTCCACGCGCTGCCGCGAGATGCC
GCAGAACCTGAGCACCAAGCCGCAGGACCTGTGCGCCACGCGGAACCCTGACATGGAGGTGGATGAGAAC
GGGACCCTGGACCTCAGCATGAACAAGCAGAGGCCGCGGGACAGCTGCTGCCCCATCCTGACCCCTCTGG
AGCCCATGTCCCCCCAGCAGCAGGCAGTGATGAACAACCGGTGTTTCCAGCTGGGCGAGGGCGACTGCTG
GGACTTGCCCGTAGACTACACCAAAATGAAACCCCGGAGGATAGACGAGGACGAGTCCAAAGACATTACT
CCAGAAGACTTGGACCCATTCCAGGAGGCTCTAGAAGAAAGACGGTATCCCGGGGAGGTGACCATCCCAA
GTCCCAAACCCAAGTACCCTCAGTGCAAGGAGAGCAAAAAGGACTTAATAACTCTGTCTGGCTGCCCCCT
GGCGGACAAAAGCATTCGAAGTATGCTGGCCACCAGCTCCCAAGAACTCAAGTGCCCCACGCCTGGCTGT
GATGGTTCTGGACATATCACCGGCAATTATGCTTCTCATCGGAGCCTTTCAGGTTGCCCAAGAGCAAAGA
AAAGTGGTATCAGGATAGCACAGAGCAAAGAAGATAAAGAAGATCAAGAACCCATCAGGTGTCCGGTCCC
CGGGTGCGACGGCCAGGGCCACATCACTGGGAAGTACGCGTCCCATCGCAGCGCCTCCGGGTGCCCCTTG
GCGGCCAAGAGGCAGAAAGACGGGTACCTGAATGGCTCCCAGTTCTCCTGGAAGTCGGTCAAGACGGAAG
GCATGTCCTGCCCCACGCCAGGATGCGACGGCTCAGGCCACGTCAGCGGCAGCTTCCTCACACACCGCAG
CTTGTCAGGATGCCCGAGAGCCACGTCAGCGATGAAGAAGGCAAAGCTTTCTGGAGAGCAGATGCTGACC
ATCAAACAGCGGGCCAGCAACGGTATAGAAAATGATGAAGAAATCAAACAGTTAGATGAAGAAATCAAGG
AGCTAAATGAATCCAATTCCCAGATGGAAGCCGATATGATTAAACTCAGAACTCAGATTACCACGATGGA
GAGCAACCTGAAGACCATCGAAGAGGAGAACAAAGTGATTGAGCAGCAGAACGAGTCTCTCCTCCACGAG
CTGGCGAACCTGAGCCAGTCTCTGATCCACAGCCTGGCTAACATCCAGCTGCCGCACATGGATCCAATCA
ATGAACAAAATTTTGATGCTTACGTGACTACTTTGACGGAAATGTATACAAATCAAGATCGTTATCAGAG
TCCAGAAAATAAAGCCCTACTGGAAAATATAAAGCAGGCTGTGAGAGGAATTCAGGTCTGA

Translation (1186 aa):
MEVDTEEKRHRTRSKGVRVPVEPAIQELFSCPTPGCDGSGHVSGKYARHRSVYGCPLAKKRKTQDKQPQE
PAPKRKPFAVKADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDE
DDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAKSLLNLGK
IAEDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKSELSLDLDSDVVRETVDSLKLLAQGHGVVLSENM
NDRNYADSMSQQDSRNMNYVMLGKPMNNGLMEKMVEESDEEVCLSSLECLRNQCFDLARKLSETNPQERN
PQQNMNIRQHVRPEEDFPGRTPDRNYSDMLNLMRLEEQLSPRSRVFASCAKEDGCHERDDDTTSVNSDRS
EEVFDMTKGNLTLLEKAIALETERAKAMREKMAMEAGRRDNMRSYEDQSPRQLPGEDRKPKSSDSHVKKP
YYGKDPSRTEKKESKCPTPGCDGTGHVTGLYPHHRSLSGCPHKDRVPPEILAMHESVLKCPTPGCTGRGH
VNSNRNSHRSLSGCPIAAAEKLAKAQEKHQSCDVSKSSQASDRVLRPMCFVKQLEIPQYGYRNNVPTTTP
RSNLAKELEKYSKTSFEYNSYDNHTYGKRAIAPKVQTRDISPKGYDDAKRYCKDPSPSSSSTSSYAPSSS
SNLSCGGGSSASSTCSKSSFDYTHDMEAAHMAATAILNLSTRCREMPQNLSTKPQDLCATRNPDMEVDEN
GTLDLSMNKQRPRDSCCPILTPLEPMSPQQQAVMNNRCFQLGEGDCWDLPVDYTKMKPRRIDEDESKDIT
PEDLDPFQEALEERRYPGEVTIPSPKPKYPQCKESKKDLITLSGCPLADKSIRSMLATSSQELKCPTPGC
DGSGHITGNYASHRSLSGCPRAKKSGIRIAQSKEDKEDQEPIRCPVPGCDGQGHITGKYASHRSASGCPL
AAKRQKDGYLNGSQFSWKSVKTEGMSCPTPGCDGSGHVSGSFLTHRSLSGCPRATSAMKKAKLSGEQMLT
IKQRASNGIENDEEIKQLDEEIKELNESNSQMEADMIKLRTQITTMESNLKTIEEENKVIEQQNESLLHE
LANLSQSLIHSLANIQLPHMDPINEQNFDAYVTTLTEMYTNQDRYQSPENKALLENIKQAVRGIQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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