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Report for CCDS23213.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23213.1 Public Mus musculus 9 Imp3 23 108 98 CCDS HistoryNCBI Gene:102462Re-query CCDS DB by CCDS ID:23213.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23213.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034827.9 ENSMUSP00000034827.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034827.9Link to Ensembl Protein Viewer:ENSMUSP00000034827.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000034827Re-query CCDS DB by Protein ID:ENSMUSP00000034827
Original member Current member NCBI NM_133976.2 NP_598737.1 Accepted alive Link to Nucleotide Sequence:NM_133976.2Link to Protein Sequence:NP_598737.1Re-query CCDS DB by Nucleotide ID:NM_133976Re-query CCDS DB by Protein ID:NP_598737Link to BLAST:NP_598737.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598737.1 184 Q921Y2 184 100% 0 0

Chromosomal Locations for CCDS 23213.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 56937507 56938061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGGTGCGGAAGCTTAAGTTCCACGAGCAGAAGCTGCTGAAACAGGTGGACTTCCTAAACTGGGAAGTCA
CCGACCACAACCTCCACGAACTGCGTGTGCTGCGGCGGTACCGGCTGCAGCGGCGCGAGGAGTACACGCG
CTACAACCAGCTGAGCCGAGCGGTGCGCGAGCTGGCGCGGCGCCTGCGCGACCTGCCGGAACGCGACCCA
TTCCGCGTGCGCGCCTCGGCGGCGCTGTTGGACAAGCTGTACGCTATGGGCCTGGTGCCCACGCGCGGCT
CACTGGAACTCTGCGACTCCGTCTCGGCCTCGTCCTTCTGCCGCCGCCGCTTGCCTACTTTGCTCCTCAA
GCTACGCATGGCGCAGCATCTCCAAGCTGCTGTGGCTTTTGTGGAGCAGGGTCATGTCCGCGTGGGCCCA
GACGTGGTCACTGATCCCGCCTTTCTCGTCACTCGCAGCATGGAGGACTTTGTCACCTGGGTGGACTCAT
CCAAGATCAAGCGGCACGTGTTGGAGTACAATGAGGAGCGCGATGACTTTGATCTAGATGCCTAG

Translation (184 aa):
MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREEYTRYNQLSRAVRELARRLRDLPERDP
FRVRASAALLDKLYAMGLVPTRGSLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHVRVGP
DVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFDLDA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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