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Report for CCDS31598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31598.1 Public Homo sapiens 11 RASGRP2 24 110 108 CCDS HistoryNCBI Gene:10235Re-query CCDS DB by CCDS ID:31598.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31598.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354024.7 ENSP00000338864.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354024.7Link to Ensembl Protein Viewer:ENSP00000338864.3Re-query CCDS DB by Nucleotide ID:ENST00000354024Re-query CCDS DB by Protein ID:ENSP00000338864
Original member Current member EBI ENST00000377497.7 ENSP00000366717.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377497.7Link to Ensembl Protein Viewer:ENSP00000366717.3Re-query CCDS DB by Nucleotide ID:ENST00000377497Re-query CCDS DB by Protein ID:ENSP00000366717
Original member Current member EBI ENST00000394432.8 ENSP00000377953.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394432.8Link to Ensembl Protein Viewer:ENSP00000377953.3Re-query CCDS DB by Nucleotide ID:ENST00000394432Re-query CCDS DB by Protein ID:ENSP00000377953
Original member Current member NCBI NM_001098670.2 NP_001092140.1 Accepted alive Link to Nucleotide Sequence:NM_001098670.2Link to Protein Sequence:NP_001092140.1Re-query CCDS DB by Nucleotide ID:NM_001098670Re-query CCDS DB by Protein ID:NP_001092140Link to BLAST:NP_001092140.1
Original member Current member NCBI NM_001098671.2 NP_001092141.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001098671.2Link to Protein Sequence:NP_001092141.1Re-query CCDS DB by Nucleotide ID:NM_001098671Re-query CCDS DB by Protein ID:NP_001092141Link to BLAST:NP_001092141.1
Original member Current member NCBI NM_153819.1 NP_722541.1 Accepted alive Link to Nucleotide Sequence:NM_153819.1Link to Protein Sequence:NP_722541.1Re-query CCDS DB by Nucleotide ID:NM_153819Re-query CCDS DB by Protein ID:NP_722541Link to BLAST:NP_722541.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092140.1 609 Q7LDG7-1 609 100% 0 0
NP_001092141.1 609 Q7LDG7-1 609 100% 0 0
NP_722541.1 609 Q7LDG7-1 609 100% 0 0

Chromosomal Locations for CCDS 31598.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64727302 64727360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64728863 64729042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64729762 64729798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64730053 64730194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64735112 64735227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64735542 64735664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64735903 64735980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64736753 64737034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64739360 64739476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64739636 64739809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64740013 64740163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64740948 64741079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64741439 64741501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64742010 64742112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64742794 64742866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1830 nt):
ATGGCAGGCACCCTGGACCTGGACAAGGGCTGCACGGTGGAGGAGCTGCTCCGCGGGTGCATCGAAGCCT
TCGATGACTCCGGGAAGGTGCGGGACCCGCAGCTGGTGCGCATGTTCCTCATGATGCACCCCTGGTACAT
CCCCTCCTCTCAGCTGGCGGCCAAGCTGCTCCACATCTACCAACAATCCCGGAAGGACAACTCCAATTCC
CTGCAGGTGAAAACGTGCCACCTGGTCAGGTACTGGATCTCCGCCTTCCCAGCGGAGTTTGACTTGAACC
CGGAGTTGGCTGAGCAGATCAAGGAGCTGAAGGCTCTGCTAGACCAAGAAGGGAACCGACGGCACAGCAG
CCTAATCGACATAGACAGCGTCCCTACCTACAAGTGGAAGCGGCAGGTGACTCAGCGGAACCCTGTGGGA
CAGAAAAAGCGCAAGATGTCCCTGTTGTTTGACCACCTGGAGCCCATGGAGCTGGCGGAGCATCTCACCT
ACTTGGAGTATCGCTCCTTCTGCAAGATCCTGTTTCAGGACTATCACAGTTTCGTGACTCATGGCTGCAC
TGTGGACAACCCCGTCCTGGAGCGGTTCATCTCCCTCTTCAACAGCGTCTCACAGTGGGTGCAGCTCATG
ATCCTCAGCAAACCCACAGCCCCGCAGCGGGCCCTGGTCATCACACACTTTGTCCACGTGGCGGAGAAGC
TGCTACAGCTGCAGAACTTCAACACGCTGATGGCAGTGGTCGGGGGCCTGAGCCACAGCTCCATCTCCCG
CCTCAAGGAGACCCACAGCCACGTTAGCCCTGAGACCATCAAGCTCTGGGAGGGTCTCACGGAACTAGTG
ACGGCGACAGGCAACTATGGCAACTACCGGCGTCGGCTGGCAGCCTGTGTGGGCTTCCGCTTCCCGATCC
TGGGTGTGCACCTCAAGGACCTGGTGGCCCTGCAGCTGGCACTGCCTGACTGGCTGGACCCAGCCCGGAC
CCGGCTCAACGGGGCCAAGATGAAGCAGCTCTTTAGCATCCTGGAGGAGCTGGCCATGGTGACCAGCCTG
CGGCCACCAGTACAGGCCAACCCCGACCTGCTGAGCCTGCTCACGGTGTCTCTGGATCAGTATCAGACGG
AGGATGAGCTGTACCAGCTGTCCCTGCAGCGGGAGCCGCGCTCCAAGTCCTCGCCAACCAGCCCCACGAG
TTGCACCCCACCACCCCGGCCCCCGGTACTGGAGGAGTGGACCTCGGCTGCCAAACCCAAGCTGGATCAG
GCCCTCGTGGTGGAGCACATCGAGAAGATGGTGGAGTCTGTGTTCCGGAACTTTGACGTCGATGGGGATG
GCCACATCTCACAGGAAGAATTCCAGATCATCCGTGGGAACTTCCCTTACCTCAGCGCCTTTGGGGACCT
CGACCAGAACCAGGATGGCTGCATCAGCAGGGAGGAGATGGTTTCCTATTTCCTGCGCTCCAGCTCTGTG
TTGGGGGGGCGCATGGGCTTCGTACACAACTTCCAGGAGAGCAACTCCTTGCGCCCCGTCGCCTGCCGCC
ACTGCAAAGCCCTGATCCTGGGCATCTACAAGCAGGGCCTCAAATGCCGAGCCTGTGGAGTGAACTGCCA
CAAGCAGTGCAAGGATCGCCTGTCAGTTGAGTGTCGGCGCAGGGCCCAGAGTGTGAGCCTGGAGGGGTCT
GCACCCTCACCCTCACCCATGCACAGCCACCATCACCGCGCCTTCAGCTTCTCTCTGCCCCGCCCTGGCA
GGCGAGGCTCCAGGCCTCCAGAGATCCGTGAGGAGGAGGTACAGACGGTGGAGGATGGGGTGTTTGACAT
CCACTTGTAA

Translation (609 aa):
MAGTLDLDKGCTVEELLRGCIEAFDDSGKVRDPQLVRMFLMMHPWYIPSSQLAAKLLHIYQQSRKDNSNS
LQVKTCHLVRYWISAFPAEFDLNPELAEQIKELKALLDQEGNRRHSSLIDIDSVPTYKWKRQVTQRNPVG
QKKRKMSLLFDHLEPMELAEHLTYLEYRSFCKILFQDYHSFVTHGCTVDNPVLERFISLFNSVSQWVQLM
ILSKPTAPQRALVITHFVHVAEKLLQLQNFNTLMAVVGGLSHSSISRLKETHSHVSPETIKLWEGLTELV
TATGNYGNYRRRLAACVGFRFPILGVHLKDLVALQLALPDWLDPARTRLNGAKMKQLFSILEELAMVTSL
RPPVQANPDLLSLLTVSLDQYQTEDELYQLSLQREPRSKSSPTSPTSCTPPPRPPVLEEWTSAAKPKLDQ
ALVVEHIEKMVESVFRNFDVDGDGHISQEEFQIIRGNFPYLSAFGDLDQNQDGCISREEMVSYFLRSSSV
LGGRMGFVHNFQESNSLRPVACRHCKALILGIYKQGLKCRACGVNCHKQCKDRLSVECRRRAQSVSLEGS
APSPSPMHSHHHRAFSFSLPRPGRRGSRPPEIREEEVQTVEDGVFDIHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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