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Report for CCDS58966.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58966.1 Public Homo sapiens 5 MINAR2 24 110 108 CCDS HistoryNCBI Gene:100127206Re-query CCDS DB by CCDS ID:58966.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58966.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000564719.2 ENSP00000454268.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000564719.2Link to Ensembl Protein Viewer:ENSP00000454268.1Re-query CCDS DB by Nucleotide ID:ENST00000564719Re-query CCDS DB by Protein ID:ENSP00000454268
Original member Current member NCBI NM_001257308.2 NP_001244237.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001257308.2Link to Protein Sequence:NP_001244237.1Re-query CCDS DB by Nucleotide ID:NM_001257308Re-query CCDS DB by Protein ID:NP_001244237Link to BLAST:NP_001244237.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001244237.1 190 P59773 190 100% 0 0

Chromosomal Locations for CCDS 58966.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 129748191 129748355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129760378 129760605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129764884 129765063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGATCTCTCTGTTTTGCCAAATAACAACCATCCTGACAAATTCCTGCAGCTTGACGTAAAGTCTTTAA
CGAGGAGCTCAGCCCTCCTTCAGGCCAGCCTGGTGAGGTTTCCGGGTGGAAATTATCCTGCTGCACAACA
CTGGCAAAACCTTGTCTACTCACAGAGGGAAAAGAAGAATATTGCTGCTCAACGAATTAGGGGATCCAGT
GCAGACAGCCTTGTCACTGCTGATAGCCCCCCACCATCCATGTCATCAGTTATGAAGAATAACCCACTCT
ATGGTGACCTAAGTTTGGAGGAAGCTATGGAAGAAAGAAAAAAGAACCCCTCATGGACCATTGAGGAATA
TGACAAACATTCCCTGCACACAAACCTCTCTGGACATCTGAAGGAAAATCCTAATGACCTGCGGTTTTGG
TTGGGAGACATGTACACTCCAGGTTTTGACACTTTATTGAAAAAGGAAGAGAAACAAGAGAAGCATTCAA
AATTCTGTCGTATGGGTCTGATTTTACTTGTCGTTATCTCCATCTTGGTTACCATAGTGACTATCATTAC
TTTTTTCACCTGA

Translation (190 aa):
MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKNIAAQRIRGSS
ADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPNDLRFW
LGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILVTIVTIITFFT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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