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Report for CCDS1309.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1309.1 Public Homo sapiens 1 ANKRD45 24 110 108 CCDS HistoryNCBI Gene:339416Re-query CCDS DB by CCDS ID:1309.1Re-query CCDS DB by GeneID:339416See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1309.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333279.3 ENSP00000331268.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333279.3Link to Ensembl Protein Viewer:ENSP00000331268.2Re-query CCDS DB by Nucleotide ID:ENST00000333279Re-query CCDS DB by Protein ID:ENSP00000331268
Original member Current member EBI ENST00000648193.1 ENSP00000498204.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648193.1Link to Ensembl Protein Viewer:ENSP00000498204.1Re-query CCDS DB by Nucleotide ID:ENST00000648193Re-query CCDS DB by Protein ID:ENSP00000498204
Original member Current member NCBI NM_198493.3 NP_940895.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198493.3Link to Protein Sequence:NP_940895.1Re-query CCDS DB by Nucleotide ID:NM_198493Re-query CCDS DB by Protein ID:NP_940895Link to BLAST:NP_940895.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940895.1 266 Q5TZF3-2 266 100% 0 0

Chromosomal Locations for CCDS 1309.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 173610145 173610215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173624787 173624925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173627065 173627159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173646846 173647013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 173659091 173659418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGGAGTCAGAAGGACCTCCAGAGTCAGAGAGTTCAGAATTTTTCTCACAGCAAGAAGAGGAAAATGAAG
AA
GAAGAAGCCCAAGAACCAGAGGAAACAGGCCCTAAGAACCCCCTTTTACAACCTGCTCTCACAGGGGA
T
GTAGAGGGTTTGCAGAAGATATTTGAGGATCCTGAGAATCCTCATCATGAACAGGCCATGCAGCTTCTC
TTA
GAAGAAGACATCGTTGGGAGAAATTTGTTGTATGCAGCTTGCATGGCTGGGCAAAGTGACGTGATTA
GA
GCTTTGGCAAAATATGGTGTGAATCTGAATGAAAAAACCACCAGAGGGTACACACTCTTACATTGTGC
T
GCAGCCTGGGGTCGTTTGGAAACTTTGAAAGCACTGGTAGAACTGGATGTTGATATAGAAGCTTTGAAC
TTC
CGGGAAGAAAGGGCTCGAGATGTTGCTGCTAGATATTCTCAGACTGAGTGTGTTGAATTCCTGGACT
GG
GCAGATGCAAGGCTGACTCTGAAAAAATATATTGCAAAAGTCTCTTTAGCTGTTACTGACACAGAAAA
G
GGATCAGGGAAACTCCTTAAGGAAGACAAGAATACCATCCTCAGTGCATGCCGTGCAAAAAATGAGTGG
TTG
GAAACCCATACAGAAGCTTCCATTAATGAGCTTTTTGAGCAGAGACAACAACTGGAAGATATTGTGA
CT
CCTATCTTCACAAAAATGACTACACCATGTCAAGTGAAAAGTGCCAAATCTGTAACAAGCCATGACCA
G
AAGAGAAGTCAAGATGATACCTCCAACTGA


Translation (266 aa):
MESEGPPESESSEFFSQQEEENEEEEAQEPEETGPKNPLLQPALTGDVEGLQKIFEDPENPHHEQAMQLL
L
EEDIVGRNLLYAACMAGQSDVIRALAKYGVNLNEKTTR
GYTLLHCAAAWGRLETLKALVELDVDIEALN
F
REERARDVAARYSQTECVEFLDWA
DARLTLKKYIAKVSLAVTDTEKGSGKLLKEDKNTILSACRAKNEW
L
ETHTEASINELFEQRQQLEDIVTPIFTKMTTP
CQVKSAKSVTSHDQKRSQDDTSN



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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