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Report for CCDS47692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47692.1 Public Homo sapiens 7 RNF148 24 110 108 CCDS HistoryNCBI Gene:378925Re-query CCDS DB by CCDS ID:47692.1Re-query CCDS DB by GeneID:378925See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47692.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434824.2 ENSP00000388207.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000434824.2Link to Ensembl Protein Viewer:ENSP00000388207.1Re-query CCDS DB by Nucleotide ID:ENST00000434824Re-query CCDS DB by Protein ID:ENSP00000388207
Original member Current member NCBI NM_198085.2 NP_932351.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198085.2Link to Protein Sequence:NP_932351.1Re-query CCDS DB by Nucleotide ID:NM_198085Re-query CCDS DB by Protein ID:NP_932351Link to BLAST:NP_932351.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932351.1 305 Q8N7C7 305 100% 0 0

Chromosomal Locations for CCDS 47692.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 122701833 122702750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGAGCTTCCTTAGAATTACCCCTTCGACGCATAGTTCTGTTTCATCTGGACTTTTGAGGCTTAGTATCT
TTCTACTACTTAGCTTTCCTGACTCAAACGGAAAAGCCATTTGGACAGCTCACCTGAATATAACATTTCA
GGTTGGAAATGAGATCACATCGGAATTAGGAGAGAGTGGAGTGTTCGGGAATCATTCTCCTCTGGAAAGG
GTGTCTGGTGTGGTGGCACTTCCTGAAGGATGGAATCAGAATGCCTGTCATCCTTTGACCAATTTCAGCA
GGCCCAAACAGGCAGACTCATGGCTGGCCCTCATCGAACGTGGAGGCTGTACTTTTACACATAAAATCAA
CGTGGCAGCAGAGAAGGGAGCAAATGGGGTGATCATCTACAACTATCAAGGTACGGGCAGTAAAGTATTT
CCCATGTCTCACCAGGGGACGGAAAATATAGTCGCGGTGATGATAAGCAACCTGAAAGGCATGGAAATTT
TGCACTCGATTCAGAAAGGAGTCTATGTGACAGTCATCATTGAAGTGGGGAGAATGCACATGCAGTGGGT
GAGCCATTACATCATGTATCTATTTACCTTCCTGGCTGCCACAATTGCCTACTTTTACTTAGATTGCGTC
TGGAGACTTACACCTAGAGTGCCCAATTCTTTCACCAGGAGGCGAAGTCAAATAAAGACAGATGTGAAGA
AAGCTATTGACCAGCTTCAACTGCGAGTTCTCAAAGAAGGGGATGAGGAATTAGACCTAAATGAAGACAA
CTGTGTTGTTTGCTTTGACACATACAAACCCCAAGATGTAGTACGCATTTTAACTTGCAAACATTTTTTC
CATAAGGCATGCATTGACCCCTGGCTTTTAGCCCATAGGACATGTCCCATGTGCAAGTGTGACATCCTGA
AAACTTAA

Translation (305 aa):
MSFLRITPSTHSSVSSGLLRLSIFLLLSFPDSNGKAIWTAHLNITFQVGNEITSELGESGVFGNHSPLER
VSGVVALPEGWNQNACHPLTNFSRPKQADSWLALIERGGCTFTHKINVAAEKGANGVIIYNYQGTGSKVF
PMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCV
WRLTPRVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFF
HKACIDPWLLAHRTCPMCKCDILKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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