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Report for CCDS36251.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36251.1 Public Mus musculus 11 Unc45b 23 108 98 CCDS HistoryNCBI Gene:217012Re-query CCDS DB by CCDS ID:36251.1Re-query CCDS DB by GeneID:217012See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36251.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000018989.13 ENSMUSP00000018989.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000018989.13Link to Ensembl Protein Viewer:ENSMUSP00000018989.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000018989Re-query CCDS DB by Protein ID:ENSMUSP00000018989
Original member NCBI NM_178680.4 NP_848795.3 Updated not alive Link to Nucleotide Sequence:NM_178680.4Link to Protein Sequence:NP_848795.3Re-query CCDS DB by Nucleotide ID:NM_178680Re-query CCDS DB by Protein ID:NP_848795
Current member NCBI NM_178680.5 NP_848795.3 Accepted alive Link to Nucleotide Sequence:NM_178680.5Link to Protein Sequence:NP_848795.3Re-query CCDS DB by Nucleotide ID:NM_178680Re-query CCDS DB by Protein ID:NP_848795Link to BLAST:NP_848795.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848795.3 929 Q8CGY6-2 929 100% 0 0

Chromosomal Locations for CCDS 36251.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 82911680 82911847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82912395 82912431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82913204 82913379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82915050 82915139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82917032 82917199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82917729 82917897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82919724 82919894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82922748 82922919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82925887 82926187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82928655 82928749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82928932 82929073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82929421 82929561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82933832 82933959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82934745 82934811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82936374 82936487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82936824 82936939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82937736 82937853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82940189 82940344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82942491 82942751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2790 nt):
ATGGCAGAGGCTGAAGCGGCACAGCTGAAGGAGGAGGGGAACCGGCATTTTCAGCTCCAGGATTACAAGG
CGGCCACCAAGAGCTACAGCCAGGCCCTGAAGCTGACCAAGGACAAGGCTCTGCTAGCTACACTCTACCG
GAATCGGGCAGCCTGCGGCCTGAAAATGGAGAGCTACGCCCAGGCAGCCTCGGATGCTTCCAGAGCCATT
GACATCAACTCTGCTGACATCAAAGCATTGTATCGGCGATGCCAGGCACTGGAGCATCTTGGCAAGTTGG
ACCAGGCATTCAAGGATGTGCAGCGCTGTGCTACCCTGGAGCCAAGGAACCAGAACTTCCAGGAGACACT
GCGGAGGCTCAACACCAGCATCCAAGAGCAGCTCCGTGTGCAGTTTTCTACAGACTCCAGGGTACAGACG
ATGTTTGAAATTCTTCTGAACGAAAACAGCGAGGCTGATAAGCGAGAGAAGGCTGCCAACAACCTCATTG
TCCTGGGCCGTGAAGAAGCGGGTGCTGAGAGGATCTTCCAGAGCAATGGAGTGGCTCTGCTGCTGCAGCT
TATGAACACCCAGCGGCCTGAGCTGCTGCTAGCGGCTGTGCGGACGCTGTCTGGCATGTGCAGTGGCCAC
AGAGCTAGGGCCACCGCCATCCTGCACGCAGTCCGCATAGACAGAATCTGCAGCCTCATGGCCCTGGAGA
ATGAAGAGATGTCCCTGGCTGTCTGCAACCTGCTCCAGGCCATCATTGACTCCCTGTCTGGAGAGGACAA
GAGAGAGCATCGTGGGAAGGAGGAGGCCTTGGTTCTAGATACCAAGAAGGACCTGAAGCAGATCACCAGC
CACCTGCTGGACATGCTGGTCAGTAAGAAAGTGTCTGGGCAGGGCAGAGACCAGGCACTGAACCTGCTTA
ATAAGAATGTCCCCAGGAAGGACCTGTCCATTCATGACAACTCACGCACCATCTATGTTGTAGATAACGG
TCTGAGGAAGATCCTGAAGGTGGTGGGGCAGGTTCCAGACCTGCCCTCCTGCCTACCCCTGACGGACAAC
ACCCGCATGCTGGCCTCCATCCTCATCAACAAGCTCTATGATGACCTGCGCTGTGACCCAGAGCGCGACC
ACTTCCGCAAGATCTGTGAGGAGTATATCACGAGCAAATTTGACCCCCAGGACATGGACAAGAATGTAAA
TGCCATCCAGACGGTGTCCGGCATCTTGCAGGGGCCCTTTGACCTGGGCAATCAGCTGCTGGGCATGAAA
GGTGTGATGGAGATGATGGTGGCTCTGTGTGGCTCGGAGCGCGAGGCAGACCAGCTGGTGGCTGTGGAGG
CTCTCATCCACGCCTCCACGAAGCTCAGCCGGGCCACCTTCATCATCACCAACGGAGTGACACTTCTTAA
GCAGATCTACAAGACCACAAAGAATGAGAAGATCAAGATCCGCACGCTGGTGGGGCTCTGTAAACTTGGC
TCAGCTGGAGGCTCCGACTATGGTCTCAGACAGTTTGCTGAAGGGTCAACAGAGAAGCTAGCCAAGCAGT
GTCGAAAGTGGCTGTGTAACACCGCCATAGACACCCGGACGCGGCGCTGGGCAGTGGAGGGCCTGGCCTA
CCTCACGCTGGACGCTGACGTGAAGGACGACTTTGTCCAGGACATCCCTGCTCTGCAGGCCATGTTTGAG
TTGGCCAAGACCAGTGACAAGACCATCCTCTACTCAGTGGCCAACACCCTGGTAAACTGCACCAACAGCT
ATGATGTCAAGGAGGTCGTCCCTGAGCTGGTGCAGCTGGCCAAGTTCTCCAAGCAACATGTGCCAGAGGA
GCACCCCAAGGACAAGAAGGACTTCGTTGACTTGCGGGTGAAACGTCTTCTGAAGGCAGGTGTCATATCT
GCACTGGCCTGCATGGTGAAGGCAGACAGTGCCATCCTCACAGACCAGACCAAGGAGCTGCTGGCCAGGG
TATTCCTGGCACTCTGTGACAATCCAAAGGACCGGGGCACCATTGTAGCTCAAGGTGGTGGCAAGGCCCT
GATCCCCCTGGCTTTGGAGGGCACAGATGTGGGCAAGGTGAAGGCAGCCCATGGGCTAGCCAAGATTGCT
GCTGTCTCCAACCCGGACATTGCCTTCCCTGGGGAGAGGGTATATGAGGTGGTGCGGCCCCTCGTGAGTC
TCCTGGACACACAGAGGGATGGGCTTCAGAACTATGAGGCTCTGCTGGGACTGACTAACCTGTCTGGGCG
CAGTGACAAACTCAGGCAGAAGATCTTCAAGGAGAAGGCCTTGCCAGACATTGAAAACTACATGTTTGAG
AACCATGACCAGCTACGGCAGGCAGCCACCGAATGCATGTGTAACATGGTGCTCAATAAGGAGGTTCAGG
AGAGGTTCCTGGCCGATGGGAATGATCGTCTGAAGCTGGTGGTGCTGCTCTGTGGGGAGGATGACCACAA
ACTGCAGAACGCAGCAGCTGGAGCTCTAGCCATGCTGACCGCGGCACATAAGAAACTGTGCCTCAAGATG
ACGGAGGTGACAACCCAGTGGCTGGAGATCCTACAGCGGCTTTGCCTGCATGACCAGTTGTCCGTGCAGC
ACCGGGGCCTGGTCATTGCCCACAACCTGCTATCAGCGGATGCTGAGCTGGCGAGGAAGCTGGTGGAGAG
CGAGCTGCTGGAGATCCTGACTGTGGTGGGAAAGCAGGAGCCAGATGAGAAGAGAGCGGCTGTGGTCCAG
ACAGCCCGGGAGTGTCTTATCAAGTGCATGGATTATGGCTTCATCAAGCCGGTGTCATAG

Translation (929 aa):
MAEAEAAQLKEEGNRHFQLQDYKAATKSYSQALKLTKDKALLATLYRNRAACGLKMESYAQAASDASRAI
DINSADIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQETLRRLNTSIQEQLRVQFSTDSRVQT
MFEILLNENSEADKREKAANNLIVLGREEAGAERIFQSNGVALLLQLMNTQRPELLLAAVRTLSGMCSGH
RARATAILHAVRIDRICSLMALENEEMSLAVCNLLQAIIDSLSGEDKREHRGKEEALVLDTKKDLKQITS
HLLDMLVSKKVSGQGRDQALNLLNKNVPRKDLSIHDNSRTIYVVDNGLRKILKVVGQVPDLPSCLPLTDN
TRMLASILINKLYDDLRCDPERDHFRKICEEYITSKFDPQDMDKNVNAIQTVSGILQGPFDLGNQLLGMK
GVMEMMVALCGSEREADQLVAVEALIHASTKLSRATFIITNGVTLLKQIYKTTKNEKIKIRTLVGLCKLG
SAGGSDYGLRQFAEGSTEKLAKQCRKWLCNTAIDTRTRRWAVEGLAYLTLDADVKDDFVQDIPALQAMFE
LAKTSDKTILYSVANTLVNCTNSYDVKEVVPELVQLAKFSKQHVPEEHPKDKKDFVDLRVKRLLKAGVIS
ALACMVKADSAILTDQTKELLARVFLALCDNPKDRGTIVAQGGGKALIPLALEGTDVGKVKAAHGLAKIA
AVSNPDIAFPGERVYEVVRPLVSLLDTQRDGLQNYEALLGLTNLSGRSDKLRQKIFKEKALPDIENYMFE
NHDQLRQAATECMCNMVLNKEVQERFLADGNDRLKLVVLLCGEDDHKLQNAAAGALAMLTAAHKKLCLKM
TEVTTQWLEILQRLCLHDQLSVQHRGLVIAHNLLSADAELARKLVESELLEILTVVGKQEPDEKRAAVVQ
TARECLIKCMDYGFIKPVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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