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Report for CCDS1812.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1812.1 Public Homo sapiens 2 PLEKHH2 24 110 108 CCDS HistoryNCBI Gene:130271Re-query CCDS DB by CCDS ID:1812.1Re-query CCDS DB by GeneID:130271See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1812.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282406.9 ENSP00000282406.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000282406.9Link to Ensembl Protein Viewer:ENSP00000282406.4Re-query CCDS DB by Nucleotide ID:ENST00000282406Re-query CCDS DB by Protein ID:ENSP00000282406
Original member Current member NCBI NM_172069.4 NP_742066.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_172069.4Link to Protein Sequence:NP_742066.2Re-query CCDS DB by Nucleotide ID:NM_172069Re-query CCDS DB by Protein ID:NP_742066Link to BLAST:NP_742066.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_742066.2 1493 Q8IVE3-1 1493 100% 0 0

Chromosomal Locations for CCDS 1812.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 43644674 43644796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43678863 43678925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43692514 43692663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43694431 43694514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43695143 43695224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43697171 43697356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43699647 43700608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43703981 43704056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43706322 43706416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43707401 43707545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43709990 43710126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43710220 43710330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43710489 43710575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43712225 43712383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43720669 43720749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43726272 43726451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43729637 43729745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43731490 43731602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43738341 43738520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43740946 43741043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43742741 43742918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43743834 43743989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43745866 43745963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43753619 43753760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43757119 43757264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43758900 43759029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43762304 43762390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43764228 43764365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43765413 43765598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4482 nt):
ATGGCAGAGCTTTCTGAGCCAGAGGGACCAGTAGATTGGAAGGAACGATGTGTAGCTCTGGAGTCCCAAC
TCATGAAATTTAGAGTTCAAGCAAGCAAGATACGAGAGCTTTTAGCAGAGAAGATGCAACAGCTTGAGAG
ACAAGTTATTGATGCTGAACGTCAAGCAGAAAAAGCTTTTCAACAGGTACAAGTTATGGAAGATAAATTA
AAAGCAGCTAATATTCAAACCAGTGAATCAGAGACAAGATTATATAATAAGTGTCAAGATCTGGAGTCGC
TAATACAGGAAAAAGATGACGTCATTCAAAACTTGGAATTGCAACTTGAAGAGCAGAAACAAATAAGAAT
ACAAGAAGCTAAAATAATAGAAGAGAAAGCAGCTAAGATAAAAGAATGGGTAACAGTTAAGTTAAATGAG
CTGGAATTGGAGAATCAGAATCTTCGTTTGATCAACCAAAACCAAACTGAAGAGATAAGAACAATGCAGT
CAAAACTACAAGAAGTTCAAGGAAAGAAGTCATCCACTGTCTCTACACTAAAGCTTTCGGAAGGCCAGCG
CCTGAGCAGTTTGACCTTTGGGTGCTTTTTATCTCGAGCAAGGAGTCCTCCTCAAGTAGTAAAATCTGAG
GAAATGAGCAAGATATCATCGAAAGAACCTGAGTTCACTGAAGGAAAAGACATGGAAGAAATGGAAATTC
CAGAAAAGTCTGTTGATAACCAAGTTCTAGAAAACAACAGAGGCCAGAGAACATTGCATCAAACCCCTTG
TGGCTCAGAACAGAATCGGAAAACAAGAACAAGCTTTGCCACAGATGGTGGCATCTCCCAGAATTCTGGG
GCTCCTGTGAGTGACTGGAGCTCTGATGAGGAAGACGGGAGCAAAGGAAGATCCAAGTCCAGATGCACAT
CCACCCTCTCCAGTCACACATCTGAGGAAGGGGTCCAGTGTAGCAGGATGGGAAGTGAAATGTATCTGAC
AGCATCTGATGACAGCAGCTCTATATTTGAGGAAGAGACTTTTGGCATAAAGAGACCAGAACACAAGAAG
CTATATTCTTGGCAGCAGGAGGCACAGTGGAAAGCTCTAAATAGTCCTCTTGGAAAGGGAAATTCTGAAT
TAAGTAAAAAGGAACAAGATAGTTCCTCGGATGAACTGAATAAAAAATTTCAATCCCAGAGACTCGATTA
TTCATCTTCATCGAGTGAAGCCAACACCCCAAGCCCTATTTTGACCCCAGCTTTAATGCCAAAGCATCCT
AACTCACTCTCTGGAAAAGGAACACAATTAGTGCCTTCATCACACCTGCCACCCCCAAAGTTAAGGATTC
CTAATGTTTTCAGTATAAGTGTAGCACTAGCCAAAAGGCACTTAAGCCAGCCACAGTTAAGCTCTGACAG
GATGTTTGGTACAAATAGAAACGCTATAAGCATGATACGACCACTGAGACCTCAGGAAACTGATCTTGAT
CTAGTTGATGGAGACAGTACAGAAGTTTTAGAGAATATGGACACGAGTTGTGATGATGGATTATTTTCCT
ATGACTCCTTGGACTCTCCAAATTCAGATGACCAGGAACACTGTGACTCAGCAAAGAAGGTGGCATACAG
CAAACCTCCAACTCCTCCCCTGCACCGTTTTCCTTCTTGGGAAAGCAGAATTTATGCTGTAGCCAAATCA
GGTATTCGAATGTCTGAGGCCTTCAATATGGAGAGTGTTAATAAAAATTCTGCTGCAACCCTTTCCTATA
CTACATCAGGACTTTATACATCTCTGATATACAAGAACATGACCACCCCAGTGTATACAACTTTGAAGGG
GAAGGCGACCCAAATAAGTAGCAGCCCTTTCCTGGATGACTCATCTGGGTCAGAGGAAGAAGACAGCTCC
AGATCCAGCTCCCGGACGTCAGAGTCAGACTCACGCAGTAGGAGTGGGCCAGGCAGCCCCAGAGCCATGA
AACGAGGTGTGTCTCTCTCCTCTGTGGCTTCTGAAAGTGATTATGCTATTCCTCCTGATGCTTACTCCAC
AGACACGGAGTACTCACAGCCAGAGCAGAAGCTCCCAAAAACTTGCTCATCTTCCAGTGATAATGGGAAA
AATGAACCACTGGAAAAATCTGGTTATTTATTAAAAATGAGTGGTAAAGTCAAGTCTTGGAAGCGGCGGT
GGTTTGTTCTTAAAGGTGGTGAATTACTTTACTACAAATCTCCGAGTGATGTAATTAGAAAACCCCAGGG
CCATATTGAACTTAGTGCATCCTGTAGTATTTTAAGAGGAGATAACAAACAAACAGTTCAGTTGACCACT
GAAAAACACACATACTATCTGACTGCAGATTCTCCCAATATATTGGAAGAGTGGATTAAAGTGTTACAGA
ATGTTCTTCGAGTACAAGCTGCCAACCCACTTTCCCTGCAGCCTGAGGGCAAACCCACCATGAAGGGATT
GCTCACTAAGGTAAAACATGGATATTCCAAGAGAGTCTGGTGTACACTAATAGGAAAGACATTATATTAT
TTTCGGAGTCAAGAAGATAAGTTTCCTTTAGGTCAGATCAAACTCTGGGAGGCTAAAGTGGAAGAGGTTG
ACAGATCTTGTGATTCAGATGAAGATTATGAAGCCAGTGGACGAAGTCTGTTATCCACACATTATACTAT
CGTTATCCATCCCAAAGACCAAGGTCCAACTTACCTCCTAATTGGATCCAAGCATGAAAAGGACACTTGG
CTTTATCATCTGACTGTTGCAGCTGGAAGCAACAATGTAAACGTTGGATCTGAATTTGAACAACTGGTTT
GCAAATTGCTAAATATAGACGGGGAGCCTTCCTCTCAGATATGGAGACACCCCACTTTGTGTCACAGTAA
AGAAGGAATCATTTCCCCTCTGACAACTCTACCTTCCGAAGCCCTGCAGACAGAAGCTATTAAATTATTT
AAGACCTGCCAGCTTTTTATAAATGCTGCAGTTGACTCTCCTGCAATTGATTACCACATATCTTTAGCCC
AGAGTGCTTTGCAAATCTGCCTGACACATCCTGAGCTGCAGAATGAAATTTGCTGTCAGCTTATTAAACA
GACAAGACGAAGACAGCCACAGAATCAACCAGGACCATTGCAGGGCTGGCAGCTCTTGGCACTCTGCGTT
GGGCTCTTCCTTCCCCATCATCCTTTCCTGTGGCTCCTCAGGCTTCACCTAAAGAGGAATGCAGATTCCA
GGACAGAATTTGGAAAATATGCCATTTACTGCCAGCGTTGTGTAGAAAGAACGCAACAAAATGGTGACAG
AGAAGCAAGACCCTCAAGGATGGAAATTCTTTCAACTCTTCTCCGAAACCCTTATCACCATTCTTTGCCC
TTTAGTATACCTGTGCACTTCATGAATGGGATATACCAGGTAGTTGGTTTTGACGCATCTACCACAGTGG
AAGAATTTTTGAATACTTTGAACCAGGACACAGGAATGAGGAAACCAGCGCAGTCTGGATTTGCGTTGTT
CACTGACGATCCTTCTGGCAGAGATTTAGAGCATTGTCTTCAAGGAAACATCAAGATTTGTGACATTATT
TCCAAATGGGAACAGGCTTCCAAAGAACAGCAGCCTGGAAAATGTGAAGGTACAAGGACTGTTCGTCTGA
CATACAAAAACAGACTATATTTCTCAGTGCAAGCTCGTGGAGAGACTGATAGAGAAAAGTTGCTGTTAAT
GTATCAGACAAATGATCAAATCATAAATGGACTTTTTCCTCTGAACAAAGATCTGGCATTAGAAATGGCA
GCTCTTTTATCTCAGGTAGAGATTGGAGATTTTGAAAGACCTTTCTCAACTCCAGCAGGGCATGTTACCA
ATCAGTGCAAAGTGAATCAAACTCTAAAGCAAGTCATAGAGAAATTTTATCCTAAAAGGTATAGAGATGG
CTGTTCTGAAGAGCAGTTAAGGCAGCTTTGCCAGCGACTTTCAACCAGATGGATGGCCCTCCGGGGACAC
AGTGCTGCTGACTGTGTGCGCATTTATTTGACAGTAGCCAGGAAGTGGCCATTCTTTGGTGCCAAGTTGT
TTCTTGCAAAACCCATAACTCCATCATCACTTGGAAGTACTTTCTTGTGGCTGGCTGTACATGAGGATGG
TTTAAGCCTCTTAGAATACAACTCCATGAGGTTAATAGTCAGCTATGTGTACAAGAGTCTAATGACCTTT
GGAGGCTATCAAGATGATTTTATGGTAGTCATTAACAATACACATTCAAAGGACAAACCAACAGAGAAAT
TACTTTTTGCCATGGCAAAACCCAAGATTCTTGAAATCACTCTTTTGATCGCCAGTTACATAAACAACTT
CCATCAGCAAAAGGCAGCATTTCACCACCTCTCTGCTCCAGCACTGCTCTCAGCCCAGACCCGGGGACCC
CAAGCCAGAATGATGGGAAGCCAGCCTCTTCTGTCAAGCAGCAGACCGACCAAAGGCCCCACCTTACTCT
GA

Translation (1493 aa):
MAELSEPEGPVDWKERCVALESQLMKFRVQASKIRELLAEKMQQLERQVIDAERQAEKAFQQVQVMEDKL
KAANIQTSESETRLYNKCQDLESLIQEKDDVIQNLELQLEEQKQIRIQEAKIIEEKAAKIKEWVTVKLNE
LELENQNLRLINQNQTEEIRTMQSKLQEVQGKKSSTVSTLKLSEGQRLSSLTFGCFLSRARSPPQVVKSE
EMSKISSKEPEFTEGKDMEEMEIPEKSVDNQVLENNRGQRTLHQTPCGSEQNRKTRTSFATDGGISQNSG
APVSDWSSDEEDGSKGRSKSRCTSTLSSHTSEEGVQCSRMGSEMYLTASDDSSSIFEEETFGIKRPEHKK
LYSWQQEAQWKALNSPLGKGNSELSKKEQDSSSDELNKKFQSQRLDYSSSSSEANTPSPILTPALMPKHP
NSLSGKGTQLVPSSHLPPPKLRIPNVFSISVALAKRHLSQPQLSSDRMFGTNRNAISMIRPLRPQETDLD
LVDGDSTEVLENMDTSCDDGLFSYDSLDSPNSDDQEHCDSAKKVAYSKPPTPPLHRFPSWESRIYAVAKS
GIRMSEAFNMESVNKNSAATLSYTTSGLYTSLIYKNMTTPVYTTLKGKATQISSSPFLDDSSGSEEEDSS
RSSSRTSESDSRSRSGPGSPRAMKRGVSLSSVASESDYAIPPDAYSTDTEYSQPEQKLPKTCSSSSDNGK
NEPLEKSGYLLKMSGKVKSWKRRWFVLKGGELLYYKSPSDVIRKPQGHIELSASCSILRGDNKQTVQLTT
EKHTYYLTADSPNILEEWIKVLQNVLRVQAANPLSLQPEGKPTMKGLLTKVKHGYSKRVWCTLIGKTLYY
FRSQEDKFPLGQIKLWEAKVEEVDRSCDSDEDYEASGRSLLSTHYTIVIHPKDQGPTYLLIGSKHEKDTW
LYHLTVAAGSNNVNVGSEFEQLVCKLLNIDGEPSSQIWRHPTLCHSKEGIISPLTTLPSEALQTEAIKLF
KTCQLFINAAVDSPAIDYHISLAQSALQICLTHPELQNEICCQLIKQTRRRQPQNQPGPLQGWQLLALCV
GLFLPHHPFLWLLRLHLKRNADSRTEFGKYAIYCQRCVERTQQNGDREARPSRMEILSTLLRNPYHHSLP
FSIPVHFMNGIYQVVGFDASTTVEEFLNTLNQDTGMRKPAQSGFALFTDDPSGRDLEHCLQGNIKICDII
SKWEQASKEQQPGKCEGTRTVRLTYKNRLYFSVQARGETDREKLLLMYQTNDQIINGLFPLNKDLALEMA
ALLSQVEIGDFERPFSTPAGHVTNQCKVNQTLKQVIEKFYPKRYRDGCSEEQLRQLCQRLSTRWMALRGH
SAADCVRIYLTVARKWPFFGAKLFLAKPITPSSLGSTFLWLAVHEDGLSLLEYNSMRLIVSYVYKSLMTF
GGYQDDFMVVINNTHSKDKPTEKLLFAMAKPKILEITLLIASYINNFHQQKAAFHHLSAPALLSAQTRGP
QARMMGSQPLLSSSRPTKGPTLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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