CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS7789.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
7789.1 |
Public |
Homo sapiens |
11 |
STK33 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:65975](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:7789.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:65975](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 11 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 7789.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000315204.5 |
ENSP00000320754.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000315204.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000320754.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000315204](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000320754](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000396672.5 |
ENSP00000379905.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000396672.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000379905.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000396672](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000379905](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000447869.5 |
ENSP00000416750.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000447869.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000416750.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000447869](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000416750](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000687296.1 |
ENSP00000509322.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000687296.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000509322.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000687296](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000509322](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001289061.2 |
NP_001275990.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001289061.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001275990.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001289061](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001275990](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001275990.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001352387.2 |
NP_001339316.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001352387.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001339316.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001352387](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001339316](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001339316.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001352388.2 |
NP_001339317.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001352388.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001339317.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001352388](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001339317](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001339317.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001352389.2 |
NP_001339318.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001352389.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001339318.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001352389](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001339318](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001339318.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001352390.2 |
NP_001339319.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001352390.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001339319.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001352390](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001339319](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001339319.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001352391.2 |
NP_001339320.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001352391.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001339320.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001352391](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001339320](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001339320.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001352392.2 |
NP_001339321.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001352392.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001339321.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001352392](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001339321](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001339321.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001352393.2 |
NP_001339322.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001352393.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001339322.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001352393](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001339322](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001339322.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_030906.4 |
NP_112168.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_030906.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_112168.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_030906](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_112168](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_112168.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 7789.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1545 nt): ATGGCTGATAGTGGCTTAGATAAAAAATCCACAAAATGCCCCGACTGTTCATCTGCTTCTCAGAAAGATG TACTTTGTGTATGTTCCAGCAAAACAAGGGTTCCTCCAGTTTTGGTGGTGGAAATGTCACAGACATCAAG CATTGGTAGTGCAGAATCTTTAATTTCACTGGAGAGAAAAAAAGAAAAAAATATCAACAGAGATATAACC TCCAGGAAAGATTTGCCCTCAAGAACCTCAAATGTAGAGAGAAAAGCATCTCAGCAACAATGGGGTCGGG GCAACTTTACAGAAGGAAAAGTTCCTCACATAAGGATTGAGAATGGAGCTGCTATTGAGGAAATCTATAC CTTTGGAAGAATATTGGGAAAAGGGAGCTTTGGAATAGTCATTGAAGCGACAGACAAGGAAACAGAAACG AAGTGGGCAATTAAAAAAGTGAACAAAGAAAAGGCTGGAAGCTCTGCTGTGAAGTTACTTGAACGAGAGG TGAACATTCTGAAAAGTGTAAAACATGAACACATCATACATCTGGAACAAGTATTTGAAACGCCAAAGAA AATGTACCTTGTGATGGAGCTTTGTGAGGATGGAGAACTCAAAGAAATTCTGGATAGGAAAGGGCATTTC TCAGAGAATGAGACAAGGTGGATCATTCAAAGTCTCGCATCAGCTATAGCATATCTTCACAATAATGATA TTGTACATAGAGATCTGAAACTGGAAAATATAATGGTTAAAAGCAGTCTTATTGATGATAACAATGAAAT AAACTTAAACATAAAGGTGACTGATTTTGGCTTAGCGGTGAAGAAGCAAAGTAGGAGTGAAGCCATGCTG CAGGCCACATGTGGGACTCCTATCTATATGGCCCCTGAAGTTATCAGTGCCCACGACTATAGCCAGCAGT GTGACATTTGGAGCATAGGCGTCGTAATGTACATGTTATTACGTGGAGAACCACCCTTTTTGGCAAGCTC AGAAGAGAAGCTTTTTGAGTTAATAAGAAAAGGAGAACTACATTTTGAAAATGCAGTCTGGAATTCCATA AGTGACTGTGCTAAAAGTGTTTTGAAACAACTTATGAAAGTAGATCCTGCTCACAGAATCACAGCTAAGG AACTACTAGATAACCAGTGGTTAACAGGCAATAAACTTTCTTCGGTGAGACCAACCAATGTATTAGAGAT GATGAAGGAATGGAAAAATAACCCAGAAAGTGTTGAGGAAAACACAACAGAAGAGAAGAATAAGCCGTCC ACTGAAGAAAAGTTGAAAAGTTACCAACCCTGGGGAAATGTCCCTGATGCCAATTACACTTCAGATGAAG AGGAGGAAAAACAGTCTACTGCTTATGAAAAGCAATTTCCTGCAACCAGTAAGGACAACTTTGATATGTG CAGTTCAAGTTTCACATCTAGCAAACTCCTTCCAGCTGAAATCAAGGGAGAAATGGAGAAAACCCCTGTG ACTCCAAGCCAAGGAACAGCAACCAAGTACCCTGCTAAATCCGGCGCCCTGTCCAGAACCAAAAAGAAAC TCTAA
Translation (514 aa): MADSGLDKKSTKCPDCSSASQKDVLCVCSSKTRVPPVLVVEMSQTSSIGSAESLISLERKKEKNINRDIT SRKDLPSRTSNVERKASQQQWGRGNFTEGKVPHIRIENGAAIEEIYTFGRILGKGSFGIVIEATDKETET KWAIKKVNKEKAGSSAVKLLEREVNILKSVKHEHIIHLEQVFETPKKMYLVMELCEDGELKEILDRKGHF SENETRWIIQSLASAIAYLHNNDIVHRDLKLENIMVKSSLIDDNNEINLNIKVTDFGLAVKKQSRSEAML QATCGTPIYMAPEVISAHDYSQQCDIWSIGVVMYMLLRGEPPFLASSEEKLFELIRKGELHFENAVWNSI SDCAKSVLKQLMKVDPAHRITAKELLDNQWLTGNKLSSVRPTNVLEMMKEWKNNPESVEENTTEEKNKPS TEEKLKSYQPWGNVPDANYTSDEEEEKQSTAYEKQFPATSKDNFDMCSSSFTSSKLLPAEIKGEMEKTPV TPSQGTATKYPAKSGALSRTKKKL
|