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Report for CCDS30239.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30239.1 Public Mus musculus X Fundc2 23 108 98 CCDS HistoryNCBI Gene:67391Re-query CCDS DB by CCDS ID:30239.1Re-query CCDS DB by GeneID:67391See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30239.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033541.4 ENSMUSP00000033541.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033541.4Link to Ensembl Protein Viewer:ENSMUSP00000033541.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000033541Re-query CCDS DB by Protein ID:ENSMUSP00000033541
Original member Current member NCBI NM_026126.4 NP_080402.3 Accepted alive Link to Nucleotide Sequence:NM_026126.4Link to Protein Sequence:NP_080402.3Re-query CCDS DB by Nucleotide ID:NM_026126Re-query CCDS DB by Protein ID:NP_080402Link to BLAST:NP_080402.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080402.3 151 Q9D6K8 151 100% 0 0

Chromosomal Locations for CCDS 30239.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 75382433 75382451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75387102 75387252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75390784 75390859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75391640 75391771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75394310 75394387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (456 nt):
ATGGCCGCTAACAGTCAAGGAAACTTTGATGGAAAATTTGAAGCACTGGATCTTGCAGAATTAACTAAAA
AACAACCATGGTGGCGTAAGCTGTTTGGGCAGGAATCTGGGCCATCAGCTGAAAAATATAGTGTAGCAAC
CCAGCTGGTAATTGGGGGTGTTACTGGATGGTGCACTGGTTTCGTATTCCAGAAGGTTGGAAAATTGGCT
GCAACAGCTGTAGGAGGTGGATTCTTTCTCCTTCAGCTGGCAAACCATACTGGATACATCAAAGTTGACT
GGCAAAGAGTAGAAAAAGACATGAAGAAAGCCAAAGAGCAGTTGAAAATTCGTAAGAATAAGCAAATACC
AACTGAGGTCAAGAGCAAAGCTGAGGAGGTTGTATCATTTGTAAAGAAGAATGTTCTAGTGACTGGAGGA
TTTTTTGGAGGCTTTCTGCTTGGCATGGCATCCTAA

Translation (151 aa):
MAANSQGNFDGKFEALDLAELTKKQPWWRKLFGQESGPSAEKYSVATQLVIGGVTGWCTGFVFQKVGKLA
ATAVGGGFFLLQLANHTGYIKVDWQRVEKDMKKAKEQLKIRKNKQIPTEVKSKAEEVVSFVKKNVLVTGG
FFGGFLLGMAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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