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Report for CCDS7070.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7070.1 Public Homo sapiens 10 ASB13 24 110 108 CCDS HistoryNCBI Gene:79754Re-query CCDS DB by CCDS ID:7070.1Re-query CCDS DB by GeneID:79754See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7070.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357700.11 ENSP00000350331.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357700.11Link to Ensembl Protein Viewer:ENSP00000350331.6Re-query CCDS DB by Nucleotide ID:ENST00000357700Re-query CCDS DB by Protein ID:ENSP00000350331
Original member Current member NCBI NM_024701.4 NP_078977.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024701.4Link to Protein Sequence:NP_078977.2Re-query CCDS DB by Nucleotide ID:NM_024701Re-query CCDS DB by Protein ID:NP_078977Link to BLAST:NP_078977.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078977.2 278 Q8WXK3-1 278 100% 0 0

Chromosomal Locations for CCDS 7070.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 5640703 5640830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5641770 5641961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5648970 5649104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5651213 5651363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5652863 5653050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5666509 5666551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (837 nt):
ATGGAGCCCCGGGCGGCGGACGGCTGCTTCCTGGGCGACGTGGGTTTCTGGGTGGAGCGGACCCCTGTGC
ACGAGGCAGCCCAGCGGGGTGAGAGCCTGCAGCTGCAACAGCTGATCGAGAGCGGCGCCTGCGTGAACCA
GGTCACCGTGGACTCCATCACGCCCCTGCACGCAGCCAGTCTGCAGGGCCAGGCGCGGTGTGTGCAGCTG
CTGCTGGCGGCTGGGGCCCAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCG
CCTCGGGCAGCATCGAGTGTGTGAAGCTCTTGCTGTCCTACGGGGCCAAGGTCAACCCTCCCCTGTACAC
AGCGTCCCCCCTGCACGAGGCCTGCATGAGCGGGAGTTCCGAATGTGTGAGGCTTCTTATTGACGTCGGG
GCCAATCTGGAAGCGCACGATTGCCATTTTGGGACCCCTCTGCACGTTGCCTGTGCCCGGGAGCATCTGG
ACTGTGTCAAAGTGCTGCTCAATGCAGGGGCCAACGTGAATGCGGCAAAGCTTCATGAGACTGCCCTTCA
CCACGCGGCCAAGGTCAAGAATGTTGACCTCATCGAGATGCTTATCGAGTTTGGCGGCAACATCTACGCC
CGGGACAACCGCGGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGTGCTTCGAGT
ACTACGAAAAGACACCTCTGACTCTGTCACAGCTCTGCAGGGTGAACTTGAGGAAGGCCACTGGCGTCCG
AGGGCTGGAGAAGATTGCCAAGTTAAACATCCCGCCCCGGCTCATTGATTACCTCTCCTACAACTGA

Translation (278 aa):
MEPRAADGCFLGDVGFWVERTPVHEAAQRGESLQLQQLIESGACVNQVTVDSITPLHAASLQGQARCVQL
LLAAGAQVDARNIDGSTPLCDACASGSIECVKLLLSYGAKVNPPLYTASPLHEACMSGSSECVRLLIDVG
ANLEAHDCHFGTPLHVACAREHLDCVKVLLNAGANVNAAKLHETALHHAAKVKNVDLIEMLIEFGGNIYA
RDNRGKKPSDYTWSSSAPAKCFEYYEKTPLTLSQLCRVNLRKATGVRGLEKIAKLNIPPRLIDYLSYN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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