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Report for CCDS3207.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3207.1 Public Homo sapiens 3 MYNN 24 110 108 CCDS HistoryNCBI Gene:55892Re-query CCDS DB by CCDS ID:3207.1Re-query CCDS DB by GeneID:55892See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3207.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000349841.10 ENSP00000326240.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000349841.10Link to Ensembl Protein Viewer:ENSP00000326240.4Re-query CCDS DB by Nucleotide ID:ENST00000349841Re-query CCDS DB by Protein ID:ENSP00000326240
Original member Current member EBI ENST00000356716.8 ENSP00000349150.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356716.8Link to Ensembl Protein Viewer:ENSP00000349150.3Re-query CCDS DB by Nucleotide ID:ENST00000356716Re-query CCDS DB by Protein ID:ENSP00000349150
Original member Current member NCBI NM_001185118.2 NP_001172047.1 Accepted alive Link to Nucleotide Sequence:NM_001185118.2Link to Protein Sequence:NP_001172047.1Re-query CCDS DB by Nucleotide ID:NM_001185118Re-query CCDS DB by Protein ID:NP_001172047Link to BLAST:NP_001172047.1
Original member Current member NCBI NM_018657.5 NP_061127.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018657.5Link to Protein Sequence:NP_061127.1Re-query CCDS DB by Nucleotide ID:NM_018657Re-query CCDS DB by Protein ID:NP_061127Link to BLAST:NP_061127.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001172047.1 610 Q9NPC7-1 610 100% 0 0
NP_061127.1 610 Q9NPC7-1 610 100% 0 0

Chromosomal Locations for CCDS 3207.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 169774296 169774561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169778768 169779561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169780590 169780749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169782465 169782643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169783477 169783560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169784622 169784708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 169786416 169786678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1833 nt):
ATGCAGTATTCGCACCACTGTGAGCACCTTTTAGAGAGACTGAACAAACAGCGGGAAGCAGGTTTTCTCT
GTGACTGTACCATAGTGATTGGGGAATTCCAGTTTAAAGCTCATAGGAATGTGCTGGCCTCCTTTAGTGA
GTATTTTGGTGCGATCTACAGAAGCACTTCTGAGAACAATGTCTTTCTTGATCAGAGTCAGGTGAAGGCT
GATGGATTTCAGAAACTGTTGGAGTTTATATACACAGGAACTTTAAATCTTGACAGTTGGAATGTTAAAG
AAATTCATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGTGGTCACTAAATGCAAAATAAAGATGGAAGA
TTTTGCTTTTATTGCTAATCCTTCTTCTACAGAGATATCTAGTATTACTGGAAACATTGAATTGAATCAA
CAGACTTGTCTTCTTACTCTGCGAGATTATAATAATCGAGAGAAATCAGAAGTATCTACAGATTTGATTC
AGGCAAATCCTAAACAAGGCGCGTTAGCGAAAAAGTCATCTCAAACGAAAAAGAAGAAGAAGGCTTTCAA
CTCCCCGAAAACAGGGCAGAATAAAACAGTGCAATATCCCAGTGACATCTTAGAGAATGCATCTGTTGAA
TTATTCCTAGATGCAAATAAACTGCCCACACCTGTAGTAGAACAAGTTGCACAAATAAATGATAATTCAG
AACTCGAGTTGACATCAGTTGTGGAAAATACTTTTCCAGCACAAGATATTGTGCACACTGTTACAGTGAA
ACGGAAACGTGGAAAATCACAGCCAAACTGTGCTCTGAAAGAACACTCTATGTCTAATATAGCCAGCGTC
AAGAGTCCTTATGAGGCGGAGAACTCCGGGGAAGAGCTGGATCAGAGGTATTCCAAGGCCAAGCCAATGT
GTAACACATGTGGGAAAGTGTTTTCAGAAGCCAGCAGTTTGAGAAGGCACATGAGAATACATAAAGGAGT
CAAACCTTACGTCTGCCACTTATGTGGAAAGGCATTTACCCAATGTAACCAGCTGAAAACGCATGTAAGA
ACTCATACAGGTGAGAAGCCATACAAATGTGAATTGTGTGATAAAGGATTTGCTCAGAAATGTCAGCTAG
TCTTCCATAGTCGCATGCATCATGGTGAAGAAAAACCCTATAAATGTGATGTATGCAACTTACAGTTTGC
AACTTCTAGCAATCTCAAGATTCATGCAAGGAAGCATAGTGGAGAGAAGCCATATGTCTGTGATAGGTGT
GGACAGAGATTTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGCCTTATG
TATGTGATACCTGTGGGAAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGG
TGAAAAACCATACATATGTGGTATTTGTGGGAAAAGTTTTATTTCCTCAGGAGAGCTCAACAAACACTTT
CGGTCCCATACAGGAGAAAGACCATTTATCTGCGAATTATGTGGAAATTCTTACACAGATATTAAAAATT
TAAAGAAGCACAAAACAAAAGTCCATTCTGGTGCAGATAAAACTCTAGACTCCAGTGCAGAGGATCATAC
TTTGAGTGAACAGGATTCCATACAAAAAAGTCCTTTATCAGAAACTATGGATGTGAAGCCTTCTGATATG
ACTTTACCATTAGCTCTTCCACTTGGGACTGAGGACCATCACATGCTTCTGCCTGTCACGGATACTCAGT
CTCCTACATCAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTTTTTTACA
ACAATTATACTGA

Translation (610 aa):
MQYSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTSENNVFLDQSQVKA
DGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKMEDFAFIANPSSTEISSITGNIELNQ
QTCLLTLRDYNNREKSEVSTDLIQANPKQGALAKKSSQTKKKKKAFNSPKTGQNKTVQYPSDILENASVE
LFLDANKLPTPVVEQVAQINDNSELELTSVVENTFPAQDIVHTVTVKRKRGKSQPNCALKEHSMSNIASV
KSPYEAENSGEELDQRYSKAKPMCNTCGKVFSEASSLRRHMRIHKGVKPYVCHLCGKAFTQCNQLKTHVR
THTGEKPYKCELCDKGFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSNLKIHARKHSGEKPYVCDRC
GQRFAQASTLTYHVRRHTGEKPYVCDTCGKAFAVSSSLITHSRKHTGEKPYICGICGKSFISSGELNKHF
RSHTGERPFICELCGNSYTDIKNLKKHKTKVHSGADKTLDSSAEDHTLSEQDSIQKSPLSETMDVKPSDM
TLPLALPLGTEDHHMLLPVTDTQSPTSDTLLRSTVNGYSEPQLIFLQQLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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