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Report for CCDS7766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7766.1 Public Homo sapiens 11 TIMM10B 24 110 108 CCDS HistoryNCBI Gene:26515Re-query CCDS DB by CCDS ID:7766.1Re-query CCDS DB by GeneID:26515See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254616.11 ENSP00000254616.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254616.11Link to Ensembl Protein Viewer:ENSP00000254616.6Re-query CCDS DB by Nucleotide ID:ENST00000254616Re-query CCDS DB by Protein ID:ENSP00000254616
Original member Current member EBI ENST00000533379.1 ENSP00000436948.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533379.1Link to Ensembl Protein Viewer:ENSP00000436948.1Re-query CCDS DB by Nucleotide ID:ENST00000533379Re-query CCDS DB by Protein ID:ENSP00000436948
Original member Current member EBI ENST00000640959.1 ENSP00000491841.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000640959.1Link to Ensembl Protein Viewer:ENSP00000491841.1Re-query CCDS DB by Nucleotide ID:ENST00000640959Re-query CCDS DB by Protein ID:ENSP00000491841
Original member Current member NCBI NM_012192.4 NP_036324.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012192.4Link to Protein Sequence:NP_036324.1Re-query CCDS DB by Nucleotide ID:NM_012192Re-query CCDS DB by Protein ID:NP_036324Link to BLAST:NP_036324.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036324.1 103 Q9Y5J6 103 100% 0 0

Chromosomal Locations for CCDS 7766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6481517 6481555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6481757 6481852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6482045 6482221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGGAGCGGCAGCAGCAGCAGCAACAGCAACTGCGAAACCTGCGTGACTTCCTGTTGGTCTACAATCGGA
TGACAGAACTCTGCTTCCAGCGCTGTGTGCCCAGCTTGCACCACCGAGCTCTGGACGCTGAGGAGGAGGC
CTGTCTGCACAGCTGTGCTGGGAAGCTGATCCATTCCAACCACCGCCTCATGGCCGCTTACGTGCAGCTC
ATGCCTGCCCTGGTACAGCGCCGCATCGCAGACTACGAGGCTGCCTCGGCTGTGCCAGGCGTTGCTGCTG
AACAGCCTGGGGTCTCTCCATCAGGCAGCTAG

Translation (103 aa):
MERQQQQQQQLRNLRDFLLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRLMAAYVQL
MPALVQRRIADYEAASAVPGVAAEQPGVSPSGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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