CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS94090.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
94090.1 |
Public |
Homo sapiens |
7 |
SPDYE1 |
24 |
110 |
108 |
|
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 94090.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000652520.1 |
ENSP00000499187.1 |
|
Accepted |
alive |
|
|
|
EBI |
ENST00000693451.1 |
ENSP00000509569.1 |
MANE Select |
Accepted |
alive |
|
|
|
NCBI |
NM_001378423.2 |
NP_001365352.1 |
MANE Select |
Accepted |
alive |
|
Chromosomal Locations for CCDS 94090.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1131 nt): ATGGACAGAACGGAGACTAGGTTCCGTAAGAGGGGACAGATTACGGGAAAGATCACGACCAGCCGTCAAC CGCACCGCCAGAATGAGCAGAGTCCCCAGCGGAGCACCTCGGGGTACCCCCTCCAGGAGGTGGTGGATGA TGAAGTGTTGGGACCATCAGCCCCTGGGGTAGATCCCAGCCCCCCATGTAGGTCCCTTGGCTGGAAAAGG AAGAGGGAGTGGTCAGATGAATCTGAGGAGGAGCCGGAGAAGGAGCTCGCCCCTGAGCCTGAGGAGACCT GGGTAGTGGAGACGCTGTGTGGGCTCAAGATGAAGCTGAAGCAACAGCGAGTGTCACCCATCCTCCTTGA GCACCACAAGGACTTCAACAGTCAGCTTGCCCCTGGGGTAGATCCCAGCCCCCCGCATAGGTCCTTTTGC TGGAAAAGGAAGATGGAGTGGTGGGACAAATCTGAGGAGTCGGAGGAGGAGCCACGGAAGGTGCTCGCCC CTGAGCCTGAGGAGATCTGGGTGGCGGAGATGCTGTGTGGCCTCAAGATGAAGCTGAAGCGACGGCGAGT GTCGCTCGTGCTCCCTGAGCACCACGAGGCCTTCAACAGGCTGCTTGAGGATCCTGTCATTAAAAGATTC CTGGCCTGGGACAAAGATCTGAGGGTGTCGGACAAGTATCTCCTTGCTATGGTCATAGCGTATTTCAGCC GAGCCGGCTTCCCCTCCTGGCAATACCAACGCCTTCATTTCTTCCTGGCTCTCTACCTGGCCAATGACAT GGAGGAGGACGACGAGGACTCCAAACAAAACATCTTCCACTTCCTGTATGGGAAGAACCGCTCTCGCATA CCCTTGCTCCGTAAGCGTCGGTTCCAGTTATACCGTTCCATGAACCCGAGGGCCAGGAAGAACCGCTCTC ACATACCCTTGGTCCGTAAGCGTCGGTTCCAGTTACGCCGTTGCATGAACCCGAGGGCCAGGAAGAACCG CTCTCAGATAGTCCTGTTCCAGAAACGTCGGTTCCACTTCTTCTGTTCCATGAGCTGCAGGGCTTGGGTT TCCCCAGAGGAGTTGGAGGAGATCCAGGCTTATGACCCAGAGCACTGGGTGTGGGCGCGAGATCGCGCTC GCCTTTCCTAG
Translation (376 aa): MDRTETRFRKRGQITGKITTSRQPHRQNEQSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPCRSLGWKR KREWSDESEEEPEKELAPEPEETWVVETLCGLKMKLKQQRVSPILLEHHKDFNSQLAPGVDPSPPHRSFC WKRKMEWWDKSEESEEEPRKVLAPEPEEIWVAEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRF LAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRLHFFLALYLANDMEEDDEDSKQNIFHFLYGKNRSRI PLLRKRRFQLYRSMNPRARKNRSHIPLVRKRRFQLRRCMNPRARKNRSQIVLFQKRRFHFFCSMSCRAWV SPEELEEIQAYDPEHWVWARDRARLS
|