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Report for CCDS81626.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81626.1 Public Homo sapiens 11 CRYAB 24 110 108 CCDS HistoryNCBI Gene:1410Re-query CCDS DB by CCDS ID:81626.1Re-query CCDS DB by GeneID:1410See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81626.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533280.6 ENSP00000435046.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533280.6Link to Ensembl Protein Viewer:ENSP00000435046.1Re-query CCDS DB by Nucleotide ID:ENST00000533280Re-query CCDS DB by Protein ID:ENSP00000435046
Original member Current member EBI ENST00000525823.1 ENSP00000435411.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000525823.1Link to Ensembl Protein Viewer:ENSP00000435411.1Re-query CCDS DB by Nucleotide ID:ENST00000525823Re-query CCDS DB by Protein ID:ENSP00000435411
Original member Current member EBI ENST00000528961.6 ENSP00000435960.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528961.6Link to Ensembl Protein Viewer:ENSP00000435960.1Re-query CCDS DB by Nucleotide ID:ENST00000528961Re-query CCDS DB by Protein ID:ENSP00000435960
Original member Current member EBI ENST00000651650.1 ENSP00000498749.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000651650.1Link to Ensembl Protein Viewer:ENSP00000498749.1Re-query CCDS DB by Nucleotide ID:ENST00000651650Re-query CCDS DB by Protein ID:ENSP00000498749
Original member Current member NCBI NM_001330379.1 NP_001317308.1 Accepted alive Link to Nucleotide Sequence:NM_001330379.1Link to Protein Sequence:NP_001317308.1Re-query CCDS DB by Nucleotide ID:NM_001330379Re-query CCDS DB by Protein ID:NP_001317308Link to BLAST:NP_001317308.1
Original member Current member NCBI NM_001368246.1 NP_001355175.1 Accepted alive Link to Nucleotide Sequence:NM_001368246.1Link to Protein Sequence:NP_001355175.1Re-query CCDS DB by Nucleotide ID:NM_001368246Re-query CCDS DB by Protein ID:NP_001355175Link to BLAST:NP_001355175.1

Chromosomal Locations for CCDS 81626.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 111908764 111908967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111910327 111910449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (327 nt):
ATGCGCCTGGAGAAGGACAGGTTCTCTGTCAACCTGGATGTGAAGCACTTCTCCCCAGAGGAACTCAAAG
TTAAGGTGTTGGGAGATGTGATTGAGGTGCATGGAAAACATGAAGAGCGCCAGGATGAACATGGTTTCAT
CTCCAGGGAGTTCCACAGGAAATACCGGATCCCAGCTGATGTAGACCCTCTCACCATTACTTCATCCCTG
TCATCTGATGGGGTCCTCACTGTGAATGGACCAAGGAAACAGGTCTCTGGCCCTGAGCGCACCATTCCCA
TCACCCGTGAAGAGAAGCCTGCTGTCACCGCAGCCCCCAAGAAATAG

Translation (108 aa):
MRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSL
SSDGVLTVNGPRKQVSGPERTIPITREEKPAVTAAPKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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