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Report for CCDS94319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94319.1 Public Homo sapiens 8 GDAP1 24 110 108 CCDS HistoryNCBI Gene:54332Re-query CCDS DB by CCDS ID:94319.1Re-query CCDS DB by GeneID:54332See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94319.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000674612.1 ENSP00000501864.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674612.1Link to Ensembl Protein Viewer:ENSP00000501864.1Re-query CCDS DB by Nucleotide ID:ENST00000674612Re-query CCDS DB by Protein ID:ENSP00000501864
Original member Current member EBI ENST00000675821.1 ENSP00000502198.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675821.1Link to Ensembl Protein Viewer:ENSP00000502198.1Re-query CCDS DB by Nucleotide ID:ENST00000675821Re-query CCDS DB by Protein ID:ENSP00000502198
Original member Current member EBI ENST00000675220.1 ENSP00000502588.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675220.1Link to Ensembl Protein Viewer:ENSP00000502588.1Re-query CCDS DB by Nucleotide ID:ENST00000675220Re-query CCDS DB by Protein ID:ENSP00000502588
Original member Current member EBI ENST00000674806.1 ENSP00000502637.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674806.1Link to Ensembl Protein Viewer:ENSP00000502637.1Re-query CCDS DB by Nucleotide ID:ENST00000674806Re-query CCDS DB by Protein ID:ENSP00000502637
Original member Current member EBI ENST00000676377.1 ENSP00000502756.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676377.1Link to Ensembl Protein Viewer:ENSP00000502756.1Re-query CCDS DB by Nucleotide ID:ENST00000676377Re-query CCDS DB by Protein ID:ENSP00000502756
Original member Current member EBI ENST00000676143.1 ENSP00000502828.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676143.1Link to Ensembl Protein Viewer:ENSP00000502828.1Re-query CCDS DB by Nucleotide ID:ENST00000676143Re-query CCDS DB by Protein ID:ENSP00000502828
Original member Current member EBI ENST00000675376.1 ENSP00000502838.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675376.1Link to Ensembl Protein Viewer:ENSP00000502838.1Re-query CCDS DB by Nucleotide ID:ENST00000675376Re-query CCDS DB by Protein ID:ENSP00000502838
Original member Current member NCBI NM_001362929.2 NP_001349858.1 Accepted alive Link to Nucleotide Sequence:NM_001362929.2Link to Protein Sequence:NP_001349858.1Re-query CCDS DB by Nucleotide ID:NM_001362929Re-query CCDS DB by Protein ID:NP_001349858Link to BLAST:NP_001349858.1
Original member Current member NCBI NM_001362932.2 NP_001349861.1 Accepted alive Link to Nucleotide Sequence:NM_001362932.2Link to Protein Sequence:NP_001349861.1Re-query CCDS DB by Nucleotide ID:NM_001362932Re-query CCDS DB by Protein ID:NP_001349861Link to BLAST:NP_001349861.1

Chromosomal Locations for CCDS 94319.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 74360154 74360310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 74361884 74361978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 74362939 74363053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 74363985 74364367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGCCTGATAAAGAAAGCATGTATTACCCACGGGTACAACATTACCGAGAGCTGCTTGACTCCTTGCCAA
TGGATGCCTATACACATGGCTGCATTTTACATCCTGAGTTAACTGTGGACTCCATGATCCCGGCTTATGC
AACTACAAGGATTCGTAGCCAAATTGGAAACACAGAGTCTGAGCTGAAGAAACTTGCTGAAGAAAACCCA
GATTTACAAGAAGCATACATTGCAAAACAGAAACGACTTAAATCAAAGCTGCTTGATCATGACAATGTCA
AGTATTTGAAGAAAATTCTTGATGAGTTGGAGAAAGTCTTGGATCAGGTTGAAACTGAATTGCAAAGAAG
AAATGAAGAAACCCCAGAAGAGGGCCAGCAACCTTGGCTCTGCGGTGAATCCTTCACCCTGGCAGACGTC
TCACTCGCTGTCACATTGCATCGACTGAAGTTCCTGGGGTTTGCAAGGAGAAACTGGGGAAACGGAAAGC
GACCAAACTTGGAAACCTATTACGAGCGTGTCTTGAAGAGAAAAACATTTAACAAGGTTTTAGGACATGT
CAACAATATATTAATCTCTGCAGTGCTGCCAACAGCATTCCGGGTGGCCAAGAAAAGGGCCCCAAAAGTT
CTTGGCACGACCCTTGTGGTTGGTTTGCTTGCAGGAGTGGGATATTTTGCTTTTATGCTTTTCAGAAAGA
GGCTTGGCAGCATGATATTAGCATTTAGACCCAGACCAAATTATTTCTAG

Translation (249 aa):
MPDKESMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENP
DLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLADV
SLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNILISAVLPTAFRVAKKRAPKV
LGTTLVVGLLAGVGYFAFMLFRKRLGSMILAFRPRPNYF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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