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Report for CCDS55942.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55942.1 Public Homo sapiens 14 WDR20 24 110 108 CCDS HistoryNCBI Gene:91833Re-query CCDS DB by CCDS ID:55942.1Re-query CCDS DB by GeneID:91833See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55942.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299135.6 ENSP00000299135.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000299135.6Link to Ensembl Protein Viewer:ENSP00000299135.6Re-query CCDS DB by Nucleotide ID:ENST00000299135Re-query CCDS DB by Protein ID:ENSP00000299135
Original member Current member EBI ENST00000555879.5 ENSP00000452470.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555879.5Link to Ensembl Protein Viewer:ENSP00000452470.1Re-query CCDS DB by Nucleotide ID:ENST00000555879Re-query CCDS DB by Protein ID:ENSP00000452470
Original member Current member NCBI NM_001242414.2 NP_001229343.1 Accepted alive Link to Nucleotide Sequence:NM_001242414.2Link to Protein Sequence:NP_001229343.1Re-query CCDS DB by Nucleotide ID:NM_001242414Re-query CCDS DB by Protein ID:NP_001229343Link to BLAST:NP_001229343.1
Original member Current member NCBI NM_001353681.2 NP_001340610.1 Accepted alive Link to Nucleotide Sequence:NM_001353681.2Link to Protein Sequence:NP_001340610.1Re-query CCDS DB by Nucleotide ID:NM_001353681Re-query CCDS DB by Protein ID:NP_001340610Link to BLAST:NP_001340610.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229343.1 86 Q8TBZ3-8 86 100% 0 0
NP_001340610.1 86 Q8TBZ3-8 86 100% 0 0

Chromosomal Locations for CCDS 55942.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 102139924 102140172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102193463 102193474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (261 nt):
ATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGT
ACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCC
TGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGC
CGGGAGCTGTACTTCTATATCTACAAGGGGGTCCGCAAGACAATCCCATGA

Translation (86 aa):
MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVG
RELYFYIYKGVRKTIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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