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Report for CCDS87601.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87601.1 Public Homo sapiens 8 TACC1 24 110 108 CCDS HistoryNCBI Gene:6867Re-query CCDS DB by CCDS ID:87601.1Re-query CCDS DB by GeneID:6867See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87601.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000518415.5 ENSP00000428706.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000518415.5Link to Ensembl Protein Viewer:ENSP00000428706.1Re-query CCDS DB by Nucleotide ID:ENST00000518415Re-query CCDS DB by Protein ID:ENSP00000428706
Original member Current member NCBI NM_001352786.2 NP_001339715.1 Accepted alive Link to Nucleotide Sequence:NM_001352786.2Link to Protein Sequence:NP_001339715.1Re-query CCDS DB by Nucleotide ID:NM_001352786Re-query CCDS DB by Protein ID:NP_001339715Link to BLAST:NP_001339715.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001339715.1 731 O75410-7 731 100% 0 0

Chromosomal Locations for CCDS 87601.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 38745468 38745493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38788704 38788819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38819522 38820635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38825308 38825368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38827168 38827288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38831125 38831177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38836162 38836287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38838470 38838546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38840224 38840267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38842287 38842447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38843289 38843395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38846699 38846819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38847955 38848023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2196 nt):
ATGAATAATATATTGAAACTTAAAAGCTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAGCTGAAACCC
CGATCCGATCACCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGACCTGGGGCCAAAAGCCA
AGAATCACAAGAAGCTGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATGTTCATCTAAGACTTGTTCT
AAACCTTCAGAAAATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGAATTTCAGAGAAGAAC
CTGAACATGATTTTAGCAAAATTTCCATCGTGAGGCCATTTTCAATAGAAACGAAGGATTCCACGGATAT
CTCGGCAGTCCTCGGAACAAAAGCAGCTCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCTGCCTTCC
AGCCCGCCAGACGCCCTCCAGGACGAGGCGATGACAGAAGGCAGCATGGGGGTCACCCTCGAGGCCTCCG
CAGAAGCTGATCTAAAAGCTGGCAACTCCTGTCCAGAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAA
GCCCAAGCCTGTCCCCCTGAGGAAGAAAGCAATTGGAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAG
GGCACACCTCTCCCCAAGGCATCCTATCACTTCAGTCCTGAAGAGTTGGATGAGAACACAAGTCCTTTGC
TAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGACCTTAAAGAAACTCCCGGCACTCTCAGTAGTGACAC
CAACGACTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTTCACA
GAAGATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGGAAACTGGGTAGCACAC
TGACTCCCAAGATACAAAAAGATGGCATCAGTAAGTCAGCAGGTTTAGAACAGCCTACAGACCCAGTGGC
ACGAGACGGGCCTCTCTCCCAAACATCTTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAGCTTCAAC
CCCTTTGGGAGCCACTCTGTTCTGCAGAACTCCCCACCCCTCTCTTCTGAGGGCTCCTACCACTTTGACC
CAGATAACTTTGACGAATCCATGGATCCCTTTAAACCAACTACGACCTTAACAAGCAGTGACTTTTGTTC
TCCCACTGGTAATCACGTTAATGAAATCTTAGAATCACCCAAGAAGGCAAAGTCGCGTTTAATAACGAGT
GGCTGTAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAAGGGGCAG
TGATCTCCCAGATTTCAGACATTTCTAATAGGGATGGCCATGCTACTGATGAGGAGAAACTGGCATCCAC
GTCATGTGGTCAGAAATCAGCTGGTGCCGAGGTGAAAGGCATAGAGAAGGAGACGTGCCAGAAGATGGAA
GAAGACGGGTCCACTGTGCTTGGGCTGCTGGAGTCCTCTGCAGAGAAGGCCCCTGTGTCGGTGTCCTGTG
GAGGTGAGAGCCCCCTGGATGGGATCTGCCTCAGCGAATCAGACAAGACAGCCGTGCTCACCTTAATAAG
AGAAGAGATAATTACTAAAGAGATTGAAGCAAATGAATGGAAGAAGAAATACGAAGAGACCCGGCAAGAA
GTTTTGGAGATGAGGAAAATTGTAGCTGAATATGAAAAGACTATTGCTCAAATGATTGAAGATGAACAAA
GGACAAGTATGACCTCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGGCCCTGGCTGACCT
TAACTCTGTGGAAAGGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACCTGAAAGGTGTTCTGGAAGGG
TTCAAGAAGAATGAAGAAGCCTTGAAGAAATGTGCTCAGGATTACTTAGCCAGAGTTAAACAAGAGGAGC
AGCGATACCAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGATTGCTCAGGT
TCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAG
TCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTGACAAAAATCTGTGATGAGCTGA
TTGCAAAGCTGGGAAAGACTGACTGA

Translation (731 aa):
MNNILKLKSSDSEGNFETPEAETPIRSPFKESCDPSLGLAGPGAKSQESQEADEQLVAEVVEKCSSKTCS
KPSENEVPQQAIDSHSVKNFREEPEHDFSKISIVRPFSIETKDSTDISAVLGTKAAHGCVTAVSGKALPS
SPPDALQDEAMTEGSMGVTLEASAEADLKAGNSCPELVPSRRSKLRKPKPVPLRKKAIGGEFSDTNAAVE
GTPLPKASYHFSPEELDENTSPLLGDARFQKSPPDLKETPGTLSSDTNDSGVELGEESRSSPLKLEFDFT
EDTGNIEARKALPRKLGRKLGSTLTPKIQKDGISKSAGLEQPTDPVARDGPLSQTSSKPDPSQWESPSFN
PFGSHSVLQNSPPLSSEGSYHFDPDNFDESMDPFKPTTTLTSSDFCSPTGNHVNEILESPKKAKSRLITS
GCKVKKHETQSLALDACSRDEGAVISQISDISNRDGHATDEEKLASTSCGQKSAGAEVKGIEKETCQKME
EDGSTVLGLLESSAEKAPVSVSCGGESPLDGICLSESDKTAVLTLIREEIITKEIEANEWKKKYEETRQE
VLEMRKIVAEYEKTIAQMIEDEQRTSMTSQKSFQQLTMEKEQALADLNSVERSLSDLFRRYENLKGVLEG
FKKNEEALKKCAQDYLARVKQEEQRYQALKIHAEEKLDKANEEIAQVRTKAKAESAALHAGLRKEQMKVE
SLERALQQKNQEIEELTKICDELIAKLGKTD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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