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Report for CCDS46811.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46811.1 Public Homo sapiens 3 ZDHHC3 24 110 108 CCDS HistoryNCBI Gene:51304Re-query CCDS DB by CCDS ID:46811.1Re-query CCDS DB by GeneID:51304See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46811.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424952.7 ENSP00000395502.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000424952.7Link to Ensembl Protein Viewer:ENSP00000395502.2Re-query CCDS DB by Nucleotide ID:ENST00000424952Re-query CCDS DB by Protein ID:ENSP00000395502
Original member Current member NCBI NM_001135179.2 NP_001128651.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135179.2Link to Protein Sequence:NP_001128651.1Re-query CCDS DB by Nucleotide ID:NM_001135179Re-query CCDS DB by Protein ID:NP_001128651Link to BLAST:NP_001128651.1
Original member Current member NCBI NM_001349380.2 NP_001336309.1 Accepted alive Link to Nucleotide Sequence:NM_001349380.2Link to Protein Sequence:NP_001336309.1Re-query CCDS DB by Nucleotide ID:NM_001349380Re-query CCDS DB by Protein ID:NP_001336309Link to BLAST:NP_001336309.1
Original member Current member NCBI NM_001349381.2 NP_001336310.1 Accepted alive Link to Nucleotide Sequence:NM_001349381.2Link to Protein Sequence:NP_001336310.1Re-query CCDS DB by Nucleotide ID:NM_001349381Re-query CCDS DB by Protein ID:NP_001336310Link to BLAST:NP_001336310.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128651.1 299 Q9NYG2-1 299 100% 0 0
NP_001336309.1 299 Q9NYG2-1 299 100% 0 0
NP_001336310.1 299 Q9NYG2-1 299 100% 0 0

Chromosomal Locations for CCDS 46811.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 44926689 44926847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44929306 44929436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44933118 44933199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44933888 44933984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44945168 44945292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44959131 44959436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGATGCTTATCCCCACCCACCACTTCCGAAACATTGAGCGGAAACCAGAATACCTCCAGCCAGAGAAGT
GTGTCCCACCCCCCTACCCTGGTCCTGTGGGAACCATGTGGTTTATCCGTGACGGCTGTGGCATCGCCTG
TGCCATCGTTACCTGGTTTCTGGTCCTCTATGCGGAGTTCGTGGTCCTCTTTGTCATGCTGATTCCATCT
CGAGACTACGTGTATAGCATCATCAACGGAATTGTGTTCAACCTGCTGGCCTTCTTGGCCCTGGCCTCCC
ACTGCCGGGCCATGCTGACGGACCCCGGGGCAGTGCCCAAAGGAAATGCCACTAAAGAATTCATCGAGAG
TTTACAGTTGAAGCCTGGGCAGGTGGTGTACAAGTGCCCCAAATGCTGCAGCATCAAGCCCGACCGAGCC
CACCACTGCAGTGTTTGTAAGCGGTGCATTCGGAAGATGGACCACCACTGTCCCTGGGTCAACAACTGTG
TAGGCGAGAACAACCAGAAGTACTTCGTCCTGTTTACAATGTACATAGCTCTCATTTCCTTGCACGCCCT
CATCATGGTGGGATTCCACTTCCTGCATTGCTTTGAAGAAGATTGGACAAAGTGCAGCTCCTTCTCTCCA
CCCACCACAGTGATTCTCCTTATCCTGCTGTGCTTTGAGGGCCTGCTCTTCCTCATTTTCACATCAGTGA
TGTTTGGGACCCAGGTGCACTCCATCTGCACAGATGAGACGGGAATAGAACAATTGAAAAAGGAAGAGAG
AAGATGGGCTAAAAAAACAAAATGGATGAACATGAAAGCCGTTTTTGGCCACCCCTTCTCTCTAGGCTGG
GCCAGCCCCTTTGCCACGCCAGACCAAGGGAAGGCAGACCCGTACCAGTATGTGGTCTGA

Translation (299 aa):
MMLIPTHHFRNIERKPEYLQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEFVVLFVMLIPS
RDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCPKCCSIKPDRA
HHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALIMVGFHFLHCFEEDWTKCSSFSP
PTTVILLILLCFEGLLFLIFTSVMFGTQVHSICTDETGIEQLKKEERRWAKKTKWMNMKAVFGHPFSLGW
ASPFATPDQGKADPYQYVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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