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Report for CCDS58860.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58860.1 Public Homo sapiens 3 ECT2 24 110 108 CCDS HistoryNCBI Gene:1894Re-query CCDS DB by CCDS ID:58860.1Re-query CCDS DB by GeneID:1894See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58860.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392692.8 ENSP00000376457.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392692.8Link to Ensembl Protein Viewer:ENSP00000376457.3Re-query CCDS DB by Nucleotide ID:ENST00000392692Re-query CCDS DB by Protein ID:ENSP00000376457
Original member Current member NCBI NM_001258315.2 NP_001245244.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001258315.2Link to Protein Sequence:NP_001245244.1Re-query CCDS DB by Nucleotide ID:NM_001258315Re-query CCDS DB by Protein ID:NP_001245244Link to BLAST:NP_001245244.1
Original member Current member NCBI NM_001349098.2 NP_001336027.1 Accepted alive Link to Nucleotide Sequence:NM_001349098.2Link to Protein Sequence:NP_001336027.1Re-query CCDS DB by Nucleotide ID:NM_001349098Re-query CCDS DB by Protein ID:NP_001336027Link to BLAST:NP_001336027.1
Original member Current member NCBI NM_001349099.2 NP_001336028.1 Accepted alive Link to Nucleotide Sequence:NM_001349099.2Link to Protein Sequence:NP_001336028.1Re-query CCDS DB by Nucleotide ID:NM_001349099Re-query CCDS DB by Protein ID:NP_001336028Link to BLAST:NP_001336028.1
Original member Current member NCBI NM_001349100.2 NP_001336029.1 Accepted alive Link to Nucleotide Sequence:NM_001349100.2Link to Protein Sequence:NP_001336029.1Re-query CCDS DB by Nucleotide ID:NM_001349100Re-query CCDS DB by Protein ID:NP_001336029Link to BLAST:NP_001336029.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001245244.1 914 Q9H8V3-1 914 100% 0 0
NP_001336027.1 914 Q9H8V3-1 914 100% 0 0
NP_001336028.1 914 Q9H8V3-1 914 100% 0 0
NP_001336029.1 914 Q9H8V3-1 914 100% 0 0

Chromosomal Locations for CCDS 58860.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 172754531 172754660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172755295 172755374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172755483 172755575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172756983 172757165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172758980 172759069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172760156 172760263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172761610 172761683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172762416 172762546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172762691 172762806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172762910 172762972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172764278 172764500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172769007 172769143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172773903 172774022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172782163 172782231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172783799 172783909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172784707 172784803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172786493 172786574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172802616 172802694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172802861 172802980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172805731 172805869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172807770 172807924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172815604 172815711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172816691 172816837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 172820148 172820237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2745 nt):
ATGGCTGAAAATAGTGTATTAACATCCACTACTGGGAGGACTAGCTTGGCAGACTCTTCCATTTTTGATT
CTAAAGTTACTGAGATTTCCAAGGAAAACTTACTTATTGGATCTACTTCATATGTAGAAGAAGAGATGCC
TCAGATTGAAACAAGAGTGATATTGGTTCAAGAAGCTGGAAAACAAGAAGAACTTATAAAAGCCTTAAAG
ACTATTAAAATAATGGAAGTCCCTGTTATAAAGATAAAAGAAAGTTGTCCTGGAAAATCGGATGAAAAAT
TAATAAAAAGTGTTATTAATATGGACATTAAAGTGGGCTTTGTAAAGATGGAGTCAGTGGAAGAATTTGA
AGGTTTGGATTCTCCGGAATTTGAAAATGTATTTGTAGTCACGGACTTTCAGGATTCTGTCTTTAATGAC
CTCTACAAGGCTGATTGTAGAGTTATTGGACCACCAGTTGTATTAAATTGTTCACAAAAAGGAGAGCCTT
TGCCATTTTCATGTCGCCCGTTGTATTGTACAAGTATGATGAATCTAGTACTATGCTTTACTGGATTTAG
GAAAAAAGAAGAACTAGTCAGGTTGGTGACATTGGTCCATCACATGGGTGGAGTTATTCGAAAAGACTTT
AATTCAAAAGTTACACATTTGGTGGCAAATTGTACACAAGGAGAAAAATTCAGGGTTGCTGTGAGTCTAG
GTACTCCAATTATGAAGCCAGAATGGATTTATAAAGCTTGGGAAAGGCGGAATGAACAGGATTTCTATGC
AGCAGTTGATGACTTTAGAAATGAATTTAAAGTTCCTCCATTTCAAGATTGTATTTTAAGTTTCCTGGGA
TTTTCAGATGAAGAGAAAACCAATATGGAAGAAATGACTGAAATGCAAGGAGGTAAATATTTACCGCTTG
GAGATGAAAGATGCACTCACCTTGTAGTTGAAGAGAATATAGTAAAAGATCTTCCCTTTGAACCTTCAAA
GAAACTTTATGTTGTCAAGCAAGAGTGGTTCTGGGGAAGCATTCAAATGGATGCCCGAGCTGGAGAAACT
ATGTATTTATATGAAAAGGCAAATACTCCTGAGCTCAAGAAATCAGTGTCAATGCTTTCTCTAAATACCC
CTAACAGCAATCGCAAACGACGTCGTTTAAAAGAAACACTTGCTCAGCTTTCAAGAGAGACAGACGTGTC
ACCATTTCCACCCCGTAAGCGCCCATCAGCTGAGCATTCCCTTTCCATAGGGTCACTCCTAGATATCTCC
AACACACCAGAGTCTAGCATTAACTATGGAGACACCCCAAAGTCTTGTACTAAGTCTTCTAAAAGCTCCA
CTCCAGTTCCTTCAAAGCAGTCAGCAAGGTGGCAAGTTGCAAAAGAGCTTTATCAAACTGAAAGTAATTA
TGTTAATATATTGGCAACAATTATTCAGTTATTTCAAGTACCATTGGAAGAGGAAGGACAACGTGGTGGA
CCTATCCTTGCACCAGAGGAGATTAAGACTATTTTTGGTAGCATCCCAGATATCTTTGATGTACACACTA
AGATAAAGGATGATCTTGAAGACCTTATAGTTAATTGGGATGAGAGCAAAAGCATTGGTGACATTTTTCT
GAAATATTCAAAAGATTTGGTAAAAACCTACCCTCCCTTTGTAAACTTCTTTGAAATGAGCAAGGAAACA
ATTATTAAATGTGAAAAACAGAAACCAAGATTTCATGCTTTTCTCAAGATAAACCAAGCAAAACCAGAAT
GTGGACGGCAGAGCCTTGTTGAACTTCTTATCCGACCAGTACAGAGGTTACCCAGTGTTGCATTACTTTT
AAATGATCTTAAGAAGCATACAGCTGATGAAAATCCAGACAAAAGCACTTTAGAAAAAGCTATTGGATCA
CTGAAGGAAGTAATGACGCATATTAATGAGGATAAGAGAAAAACAGAAGCTCAAAAGCAAATTTTTGATG
TTGTTTATGAAGTAGATGGATGCCCAGCTAATCTTTTATCTTCTCACCGAAGCTTAGTACAGCGGGTTGA
AACAATTTCTCTAGGTGAGCACCCCTGTGACAGAGGAGAACAAGTAACTCTCTTCCTCTTCAATGATTGC
CTAGAGATAGCAAGAAAACGGCACAAGGTTATTGGCACTTTTAGGAGTCCTCATGGCCAAACCCGACCCC
CAGCTTCTCTTAAGCATATTCACCTAATGCCTCTTTCTCAGATTAAGAAGGTATTGGACATAAGAGAGAC
AGAAGATTGCCATAATGCTTTTGCCTTGCTTGTGAGGCCACCAACAGAGCAGGCAAATGTGCTACTCAGT
TTCCAGATGACATCAGATGAACTTCCAAAAGAAAACTGGCTAAAGATGCTGTGTCGACATGTAGCTAACA
CCATTTGTAAAGCAGATGCTGAGAATCTTATTTATACTGCTGATCCAGAATCCTTTGAAGTAAATACAAA
AGATATGGACAGTACATTGAGTAGAGCATCAAGAGCAATAAAAAAGACTTCAAAAAAGGTTACAAGAGCA
TTCTCTTTCTCCAAAACTCCAAAAAGAGCTCTTCGAAGGGCTCTTATGACATCCCACGGCTCAGTGGAGG
GAAGAAGTCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCTTTCTAGCACATCATCATTAGCAGGTAT
CCCTTCTCCCTCCCTTGTCAGCCTTCCTTCCTTCTTTGAAAGGAGAAGTCATACGTTAAGTAGATCTACA
ACTCATTTGATATGA

Translation (914 aa):
MAENSVLTSTTGRTSLADSSIFDSKVTEISKENLLIGSTSYVEEEMPQIETRVILVQEAGKQEELIKALK
TIKIMEVPVIKIKESCPGKSDEKLIKSVINMDIKVGFVKMESVEEFEGLDSPEFENVFVVTDFQDSVFND
LYKADCRVIGPPVVLNCSQKGEPLPFSCRPLYCTSMMNLVLCFTGFRKKEELVRLVTLVHHMGGVIRKDF
NSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKAWERRNEQDFYAAVDDFRNEFKVPPFQDCILSFLG
FSDEEKTNMEEMTEMQGGKYLPLGDERCTHLVVEENIVKDLPFEPSKKLYVVKQEWFWGSIQMDARAGET
MYLYEKANTPELKKSVSMLSLNTPNSNRKRRRLKETLAQLSRETDVSPFPPRKRPSAEHSLSIGSLLDIS
NTPESSINYGDTPKSCTKSSKSSTPVPSKQSARWQVAKELYQTESNYVNILATIIQLFQVPLEEEGQRGG
PILAPEEIKTIFGSIPDIFDVHTKIKDDLEDLIVNWDESKSIGDIFLKYSKDLVKTYPPFVNFFEMSKET
IIKCEKQKPRFHAFLKINQAKPECGRQSLVELLIRPVQRLPSVALLLNDLKKHTADENPDKSTLEKAIGS
LKEVMTHINEDKRKTEAQKQIFDVVYEVDGCPANLLSSHRSLVQRVETISLGEHPCDRGEQVTLFLFNDC
LEIARKRHKVIGTFRSPHGQTRPPASLKHIHLMPLSQIKKVLDIRETEDCHNAFALLVRPPTEQANVLLS
FQMTSDELPKENWLKMLCRHVANTICKADAENLIYTADPESFEVNTKDMDSTLSRASRAIKKTSKKVTRA
FSFSKTPKRALRRALMTSHGSVEGRSPSSNDKHVMSRLSSTSSLAGIPSPSLVSLPSFFERRSHTLSRST
THLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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