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Report for CCDS61481.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61481.1 Public Homo sapiens 14 DCAF5 24 110 108 CCDS HistoryNCBI Gene:8816Re-query CCDS DB by CCDS ID:61481.1Re-query CCDS DB by GeneID:8816See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61481.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000557386.5 ENSP00000451845.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557386.5Link to Ensembl Protein Viewer:ENSP00000451845.1Re-query CCDS DB by Nucleotide ID:ENST00000557386Re-query CCDS DB by Protein ID:ENSP00000451845
Original member Current member NCBI NM_001284206.1 NP_001271135.1 Accepted alive Link to Nucleotide Sequence:NM_001284206.1Link to Protein Sequence:NP_001271135.1Re-query CCDS DB by Nucleotide ID:NM_001284206Re-query CCDS DB by Protein ID:NP_001271135Link to BLAST:NP_001271135.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271135.1 941 Q96JK2-3 941 100% 0 0

Chromosomal Locations for CCDS 61481.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 69053857 69055611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69062384 69062511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69075345 69075411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69091674 69091887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69116366 69116495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69118139 69118275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69119194 69119230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69122217 69122360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69152765 69152978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2826 nt):
ATGAAGAGGAGAGCTGGCCTGGGGGGCAGCATGAGGTCAGTGGTGGGCTTCTTGTCCCAGCGGGGCTTGC
ATGGGGACCCCCTGCTCACTCAGGACTTTCAGAGGAGACGCCTGCGGGGCTGCAGAAACCTCTACAAGAA
GGACCTCCTCGGCCACTTCGGCTGTGTCAATGCCATTGAATTCTCCAACAATGGAGGCCAGTGGCTGGTC
TCAGGAGGAGATGACCGCCGGGTTCTGCTATGGCACATGGAACAAGCCATCCACTCCAGGGTCAAGCCCA
TACAGCTGAAAGGAGAGCACCATTCCAACATTTTTTGCCTGGCTTTCAACAGTGGGAACACTAAAGTGTT
CTCTGGAGGCAATGATGAGCAAGTTATCCTCCATGATGTTGAAAGTGAGACATTGGACGTGTTTGCTCAT
GAAGATGCAGTATATGGCTTGTCTGTGAGCCCAGTGAATGACAACATTTTTGCCAGTTCCTCAGATGATG
GCCGGGTTCTCATTTGGGACATTCGGGAATCCCCCCATGGAGAGCCCTTCTGCCTGGCAAACTATCCATC
AGCCTTTCATAGTGTCATGTTTAACCCTGTGGAGCCCAGGTTGTTGGCCACAGCCAATTCAAAGGAAGGA
GTGGGACTCTGGGACATTCGAAAACCTCAGAGTTCTCTCCTGCGCTATGGTGGAAACCTGTCCCTCCAAA
GTGCCATGAGTGTACGATTCAACAGCAACGGGACCCAGCTCCTGGCCCTGAGGCGACGCCTGCCCCCTGT
GCTCTATGACATCCATTCCCGCCTGCCTGTGTTTCAGTTTGACAATCAGGGTTACTTCAACTCATGCACC
ATGAAAAGCTGCTGTTTTGCAGGAGATCGTGACCAGTATATCCTTTCGGGCTCTGATGACTTCAACCTGT
ACATGTGGAGAATTCCTGCAGATCCAGAAGCAGGTGGCATTGGTAGGGTGGTCAACGGAGCCTTCATGGT
GCTGAAAGGGCATCGATCTATTGTTAACCAAGTCCGATTTAATCCCCACACCTACATGATCTGCTCTTCT
GGTGTAGAAAAGATTATCAAGATCTGGAGCCCATACAAGCAGCCAGGATGTACTGGAGACCTCGACGGTC
GGATTGAGGACGATTCCCGCTGCCTCTATACCCATGAAGAGTACATCAGCCTTGTGCTGAACAGTGGGAG
TGGCCTGTCGCATGACTACGCCAACCAGTCGGTCCAGGAAGACCCCCGGATGATGGCCTTCTTTGACTCA
CTGGTACGCCGAGAGATCGAGGGCTGGAGCTCTGACTCAGACAGTGACCTCAGTGAGAGTACTATCCTCC
AACTGCACGCTGGGGTCAGCGAGCGCTCAGGCTACACTGACTCAGAGTCTTCGGCCTCATTGCCTCGCTC
CCCGCCTCCCACAGTAGATGAGTCTGCCGACAACGCCTTCCACCTGGGGCCCCTGCGGGTCACCACCACA
AACACAGTAGCCTCAACTCCACCAACACCCACGTGTGAGGATGCAGCCTCTCGCCAGCAGCGTCTGTCTG
CTCTGCGGCGCTACCAAGACAAACGCCTCCTGGCCCTTTCCAATGAGTCCGATTCTGAGGAGAATGTCTG
TGAGGTGGAACTAGACACAGATCTCTTTCCCCGGCCACGGTCACCCAGCCCCGAAGATGAATCCAGCAGT
TCCAGCAGCTCTAGCAGCTCTGAGGATGAGGAGGAGCTGAATGAACGCCGAGCCTCTACCTGGCAGCGGA
ATGCCATGCGGCGCCGACAGAAGACAACCCGAGAAGACAAGCCCAGTGCCCCAATCAAGCCCACCAACAC
TTACATTGGAGAAGACAACTATGATTACCCCCAGATCAAAGTGGATGACCTCTCCTCCTCCCCAACCTCG
TCCCCTGAGCGGAGCACTTCCACGCTAGAGATTCAACCAAGCCGGGCATCACCAACTTCTGACATAGAAT
CAGTTGAGCGAAAAATTTATAAAGCTTACAAGTGGCTCCGCTACTCTTATATCTCCTACTCAAATAACAA
AGATGGAGAGACCTCCTTGGTGACCGGGGAGGCAGATGAAGGGAGAGCAGGAACCAGCCACAAAGACAAC
CCAGCCCCTTCTTCCAGTAAGGAAGCCTGTCTAAACATAGCAATGGCCCAGAGGAACCAGGACCTGCCAC
CTGAAGGCTGCAGCAAGGACACTTTTAAAGAAGAGACTCCTAGAACTCCCAGCAATGGCCCAGGCCATGA
GCACAGCAGCCATGCTTGGGCAGAGGTGCCAGAGGGTACCTCTCAGGACACTGGCAATAGCGGCTCTGTA
GAGCACCCTTTTGAAACCAAGAAGCTCAATGGAAAGGCCCTGAGCAGTCGGGCTGAGGAGCCGCCTTCTC
CTCCTGTCCCCAAGGCATCTGGCTCCACTCTCAACAGCGGGTCTGGCAACTGTCCCAGGACCCAGTCTGA
TGACAGTGAGGAGAGGAGCCTCGAAACCATCTGTGCCAACCACAACAATGGACGCTTACACCCTCGTCCC
CCTCACCCTCACAATAACGGGCAGAACTTGGGGGAGCTGGAGGTGGTGGCCTACTCTTCCCCAGGACACT
CAGACACTGACCGTGATAACTCGTCCCTGACAGGGACACTCCTACACAAAGATTGTTGCGGGTCTGAAAT
GGCCTGTGAGACCCCCAATGCTGGAACAAGAGAGGACCCCACTGACACCCCAGCCACAGATAGTAGCAGG
GCTGTTCATGGCCACAGTGGCCTCAAAAGGCAACGAATTGAATTGGAAGATACAGATTCAGAGAATTCCT
CCTCAGAGAAGAAATTAAAAACATGA

Translation (941 aa):
MKRRAGLGGSMRSVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLV
SGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAFNSGNTKVFSGGNDEQVILHDVESETLDVFAH
EDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEG
VGLWDIRKPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCT
MKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSS
GVEKIIKIWSPYKQPGCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMAFFDS
LVRREIEGWSSDSDSDLSESTILQLHAGVSERSGYTDSESSASLPRSPPPTVDESADNAFHLGPLRVTTT
NTVASTPPTPTCEDAASRQQRLSALRRYQDKRLLALSNESDSEENVCEVELDTDLFPRPRSPSPEDESSS
SSSSSSSEDEEELNERRASTWQRNAMRRRQKTTREDKPSAPIKPTNTYIGEDNYDYPQIKVDDLSSSPTS
SPERSTSTLEIQPSRASPTSDIESVERKIYKAYKWLRYSYISYSNNKDGETSLVTGEADEGRAGTSHKDN
PAPSSSKEACLNIAMAQRNQDLPPEGCSKDTFKEETPRTPSNGPGHEHSSHAWAEVPEGTSQDTGNSGSV
EHPFETKKLNGKALSSRAEEPPSPPVPKASGSTLNSGSGNCPRTQSDDSEERSLETICANHNNGRLHPRP
PHPHNNGQNLGELEVVAYSSPGHSDTDRDNSSLTGTLLHKDCCGSEMACETPNAGTREDPTDTPATDSSR
AVHGHSGLKRQRIELEDTDSENSSSEKKLKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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