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Report for CCDS58825.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
58825.1 |
Public |
Homo sapiens |
3 |
ZNF620 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:253639](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:58825.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:253639](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 3 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 58825.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000418905.1 |
ENSP00000391472.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000418905.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000391472.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000418905](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000391472](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001256167.2 |
NP_001243096.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001256167.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001243096.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001256167](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001243096](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001243096.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001256168.2 |
NP_001243097.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001256168.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001243097.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001256168](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001243097](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001243097.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 58825.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (927 nt): ATGGTGGGGGGCCTGCCAGGGAATGTTTCCCAGCACCTTGACTTTGGGAGCAGCCTAGAGCAGCCACAAG GTCATTGGATAATTAAGACAAAGTCAAAGAGGAGACATTTCACAGATACCTCAGCCAGGCACCATGAGGC CTATGAGGTCAAGAATGGAGAGAAGTTTGAGAAATTAGGAAAAAATATTAGCGTCAGCACACAACTCACT ACAAATCAGACAAATCCTAGTGGTCAGATATCTTATGAATGTGGACAATGTGGCAGATATTTCATTCAAA TGGCAGACTTCCACCGACATGAGAAATGTCACACTGGTGAAAAGTCTTTTGAATGCAAAGAATGTGGAAA ATACTTCAGATATAACTCATTACTTATTCGGCATCAGATAATTCACACTGGAAAGAAACCATTTAAATGT AAAGAATGTGGAAAAGGTTTAAGTTCAGACACAGCCTTGATTCAGCATCAGAGAATCCACACTGGAGAAA AGCCCTATGAATGTAAGGAGTGCGGCAAGGCCTTCAGTAGCAGCTCTGTCTTCCTCCAGCACCAGAGGTT CCACACTGGGGAGAAGCTCTATGAATGTAACGAATGTTGGAAAACTTTCAGTTGCAGCTCAAGTTTCACT GTCCATCAGCGAATGCACACTGGGGAGAAACCTTATGAATGTAAAGAGTGTGGAAAACGATTAAGCTCCA ACACAGCCTTGACTCAGCATCAGCGAATTCACACTGGGGAGAAGCCCTTTGAATGTAAGGAGTGTGGGAA GGCATTCAATCAGAAAATAACCCTGATTCAGCACCAGCGAGTTCACACTGGCGAGAAACCTTATGAGTGT AAAGTGTGTGGTAAAACCTTCAGCTGGTGTGGAAGATTCATTCTGCATCAGAAACTACACACTCAGAAGA CACCTGTCCAAGCATAG
Translation (308 aa): MVGGLPGNVSQHLDFGSSLEQPQGHWIIKTKSKRRHFTDTSARHHEAYEVKNGEKFEKLGKNISVSTQLT TNQTNPSGQISYECGQCGRYFIQMADFHRHEKCHTGEKSFECKECGKYFRYNSLLIRHQIIHTGKKPFKC KECGKGLSSDTALIQHQRIHTGEKPYECKECGKAFSSSSVFLQHQRFHTGEKLYECNECWKTFSCSSSFT VHQRMHTGEKPYECKECGKRLSSNTALTQHQRIHTGEKPFECKECGKAFNQKITLIQHQRVHTGEKPYEC KVCGKTFSWCGRFILHQKLHTQKTPVQA
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