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Report for CCDS56093.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56093.1 Public Homo sapiens 19 ZNF568 24 110 108 CCDS HistoryNCBI Gene:374900Re-query CCDS DB by CCDS ID:56093.1Re-query CCDS DB by GeneID:374900See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56093.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000455427.7 ENSP00000413396.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455427.7Link to Ensembl Protein Viewer:ENSP00000413396.2Re-query CCDS DB by Nucleotide ID:ENST00000455427Re-query CCDS DB by Protein ID:ENSP00000413396
Original member Current member NCBI NM_001204839.2 NP_001191768.1 Accepted alive Link to Nucleotide Sequence:NM_001204839.2Link to Protein Sequence:NP_001191768.1Re-query CCDS DB by Nucleotide ID:NM_001204839Re-query CCDS DB by Protein ID:NP_001191768Link to BLAST:NP_001191768.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191768.1 571 Q3ZCX4-3 571 100% 0 0

Chromosomal Locations for CCDS 56093.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36936803 36936872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36937147 36937242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36974420 36974466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36991176 36991299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36991751 36991846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36996317 36997599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGAAACCTGCTCAAAGAAACTTGTATCGAGATGTGATGCTGGAGAACTACAGCAACCTAGTCACAGTGG
GCTGTCAAGTCACCAAACCGGATGTGATATTCAAGTTGGAGCAAGAAGAGGAGCCCTGGGTGATGGAGGA
AGAAATGTTTGGGAGGCACTGTCCAGAACCCAGAAGAGGAGAGAACTGCTGTGCGTCTGAAGTGATGGCG
GAGGGCTTGAAGTTCAAAGATGTGGTCATTTACTTCTCTCAAAAGGAGTGGGAATGCTTGCACTCTGCTC
AGAAGGATTTGTACCGAGATGTAATGTTGGAAAATTACGGCAACCTGGTCTTACTGGGGCTTTCTGATAC
TAAGCCAAATGTGATCTCCTTATTGGAGCAGAAGAAAGAGCCCTGGATGGTTAAGAGGAAGGAGACAAAA
GAATGGTGTCCAGATTGGGAGTTTGGAAGAGAAACCAAGAATTTATCTCCAAAGGAAAACATTTATGAAA
TTAGATCACCACAACAGGAGAAGGCCAGAGTTATCAGAGAAATCAGATGCCAGGTGGAGAGACAACAGGG
TCATCAGGAGGGACATTTCAGACCAGCTGTAATACCATTTACTTCCATGCAGTGCACAGCCCATAGAGAA
TATCAGTGGCTTCATACTGGAGAGAAATCCTGTGAATGCAGGAAATGTAAGAATGCTTTTAGGTACCAGT
CATGTCCTATTCAACATGAAATAATTCATAATAAGGAAAAAGAACCTGAATGTGGAGAATGTAGGAAAAT
CTTTAATAGTGGATCAGACTTGATTAAGCATCAGACGCTTCATGAAAGCAAAAAACATAGTGAAAATAAC
AAATGTGCCTTTAATCATGATTCTGGAATTACTCAACCTCAGAGCATTAATACTGGAGAGAAACCTCATA
AATGTAAGGAATGTGGGAAAGCCTTTCGTTCCAGCTCACAAATTAGTCAGCATCAGAGGATGCATCTTGG
TGAGAAACCCTATAAGTGTAGGGAGTGTGGGAAAGCCTTTCCATCCACTGCACAGCTTAATCTACATCAG
AGGATCCATACTGATGAGAAATACTATGAAAGTAAGGCGTGTGGGAAGGCCTTTACCCGTCCCTCACACC
TTTTTCGACATCAAAGAATCCATACGGGTGAGAAACCCCATAAATGTAAGGAATGTGGAAAGGCTTTTCG
TTATGACACACAGCTGAGCCTTCATCAGATAATCCATACTGGTGAAAGACGCTATGAATGCAGGGAGTGT
GGAAAGGTGTACAGTTGTGCCTCACAGCTGAGTCTACATCAAAGAATTCATACTGGTGAGAAACCCCATG
AATGTAAGGAATGTGGGAAAGCCTTTATCTCTGATTCACATCTTATTCGACATCAGAGTGTCCATACTGG
GGAGAAACCCTGTAAGTGTAAGGAATGTGGGAAGTCCTTTCGTCGTGGCTCAGAACTTACCCGACATCAG
AGAGCTCATACTGGTGAAAAACCCTATGAGTGTAAGGAATGTGAAAAGGCCTTTACTTGTAGCACAGAAC
TTGTTCGACATCAAAAAGTTCACACTGGGGAGAGACCCCATAAGTGTAAGGAATGTGGGAAGGCTTTCAT
TCGAAGGTCAGAACTCACACATCATGAGAGAAGTCACACTGGTGAGAAACCCTACGAGTGTAAGGAGTGT
GGGAAGCCCTTTGGTGGTGGCTCAGAACTTAGTTGA

Translation (571 aa):
MKPAQRNLYRDVMLENYSNLVTVGCQVTKPDVIFKLEQEEEPWVMEEEMFGRHCPEPRRGENCCASEVMA
EGLKFKDVVIYFSQKEWECLHSAQKDLYRDVMLENYGNLVLLGLSDTKPNVISLLEQKKEPWMVKRKETK
EWCPDWEFGRETKNLSPKENIYEIRSPQQEKARVIREIRCQVERQQGHQEGHFRPAVIPFTSMQCTAHRE
YQWLHTGEKSCECRKCKNAFRYQSCPIQHEIIHNKEKEPECGECRKIFNSGSDLIKHQTLHESKKHSENN
KCAFNHDSGITQPQSINTGEKPHKCKECGKAFRSSSQISQHQRMHLGEKPYKCRECGKAFPSTAQLNLHQ
RIHTDEKYYESKACGKAFTRPSHLFRHQRIHTGEKPHKCKECGKAFRYDTQLSLHQIIHTGERRYECREC
GKVYSCASQLSLHQRIHTGEKPHECKECGKAFISDSHLIRHQSVHTGEKPCKCKECGKSFRRGSELTRHQ
RAHTGEKPYECKECEKAFTCSTELVRHQKVHTGERPHKCKECGKAFIRRSELTHHERSHTGEKPYECKEC
GKPFGGGSELS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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