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Report for CCDS55838.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55838.1 Public Homo sapiens 12 DDIT3 24 110 108 CCDS HistoryNCBI Gene:1649Re-query CCDS DB by CCDS ID:55838.1Re-query CCDS DB by GeneID:1649See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55838.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000552740.5 ENSP00000447803.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000552740.5Link to Ensembl Protein Viewer:ENSP00000447803.1Re-query CCDS DB by Nucleotide ID:ENST00000552740Re-query CCDS DB by Protein ID:ENSP00000447803
Original member Current member EBI ENST00000551116.5 ENSP00000448665.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000551116.5Link to Ensembl Protein Viewer:ENSP00000448665.1Re-query CCDS DB by Nucleotide ID:ENST00000551116Re-query CCDS DB by Protein ID:ENSP00000448665
Original member Current member NCBI NM_001195053.1 NP_001181982.1 Accepted alive Link to Nucleotide Sequence:NM_001195053.1Link to Protein Sequence:NP_001181982.1Re-query CCDS DB by Nucleotide ID:NM_001195053Re-query CCDS DB by Protein ID:NP_001181982Link to BLAST:NP_001181982.1
Original member Current member NCBI NM_001195054.1 NP_001181983.1 Accepted alive Link to Nucleotide Sequence:NM_001195054.1Link to Protein Sequence:NP_001181983.1Re-query CCDS DB by Nucleotide ID:NM_001195054Re-query CCDS DB by Protein ID:NP_001181983Link to BLAST:NP_001181983.1
Original member Current member NCBI NM_001195055.1 NP_001181984.1 Accepted alive Link to Nucleotide Sequence:NM_001195055.1Link to Protein Sequence:NP_001181984.1Re-query CCDS DB by Nucleotide ID:NM_001195055Re-query CCDS DB by Protein ID:NP_001181984Link to BLAST:NP_001181984.1
Original member Current member NCBI NM_001195056.1 NP_001181985.1 Accepted alive Link to Nucleotide Sequence:NM_001195056.1Link to Protein Sequence:NP_001181985.1Re-query CCDS DB by Nucleotide ID:NM_001195056Re-query CCDS DB by Protein ID:NP_001181985Link to BLAST:NP_001181985.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001181982.1 192 P35638-2 192 100% 0 0
NP_001181983.1 192 P35638-2 192 100% 0 0
NP_001181984.1 192 P35638-2 192 100% 0 0
NP_001181985.1 192 P35638-2 192 100% 0 0

Chromosomal Locations for CCDS 55838.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57516809 57517180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57517269 57517475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGGAGCTTGTTCCAGCCACTCCCCATTATCCTGCAGATGTGCTTTTCCAGACTGATCCAACTGCAGAGA
TGGCAGCTGAGTCATTGCCTTTCTCCTTCGGGACACTGTCCAGCTGGGAGCTGGAAGCCTGGTATGAGGA
CCTGCAAGAGGTCCTGTCTTCAGATGAAAATGGGGGTACCTATGTTTCACCTCCTGGAAATGAAGAGGAA
GAATCAAAAATCTTCACCACTCTTGACCCTGCTTCTCTGGCTTGGCTGACTGAGGAGGAGCCAGAACCAG
CAGAGGTCACAAGCACCTCCCAGAGCCCTCACTCTCCAGATTCCAGTCAGAGCTCCCTGGCTCAGGAGGA
AGAGGAGGAAGACCAAGGGAGAACCAGGAAACGGAAACAGAGTGGTCATTCCCCAGCCCGGGCTGGAAAG
CAGCGCATGAAGGAGAAAGAACAGGAGAATGAAAGGAAAGTGGCACAGCTAGCTGAAGAGAATGAACGGC
TCAAGCAGGAAATCGAGCGCCTGACCAGGGAAGTAGAGGCGACTCGCCGAGCTCTGATTGACCGAATGGT
GAATCTGCACCAAGCATGA

Translation (192 aa):
MELVPATPHYPADVLFQTDPTAEMAAESLPFSFGTLSSWELEAWYEDLQEVLSSDENGGTYVSPPGNEEE
ESKIFTTLDPASLAWLTEEEPEPAEVTSTSQSPHSPDSSQSSLAQEEEEEDQGRTRKRKQSGHSPARAGK
QRMKEKEQENERKVAQLAEENERLKQEIERLTREVEATRRALIDRMVNLHQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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