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Report for CCDS44220.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44220.1 Public Homo sapiens 1 PIP5K1A 24 110 108 CCDS HistoryNCBI Gene:8394Re-query CCDS DB by CCDS ID:44220.1Re-query CCDS DB by GeneID:8394See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44220.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000441902.6 ENSP00000415648.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000441902.6Link to Ensembl Protein Viewer:ENSP00000415648.2Re-query CCDS DB by Nucleotide ID:ENST00000441902Re-query CCDS DB by Protein ID:ENSP00000415648
Original member Current member NCBI NM_001135636.2 NP_001129108.1 Accepted alive Link to Nucleotide Sequence:NM_001135636.2Link to Protein Sequence:NP_001129108.1Re-query CCDS DB by Nucleotide ID:NM_001135636Re-query CCDS DB by Protein ID:NP_001129108Link to BLAST:NP_001129108.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129108.1 522 Q99755-4 522 100% 0 0

Chromosomal Locations for CCDS 44220.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151198997 151199081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151224245 151224279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151227320 151227400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151231671 151231801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151232248 151232365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151232551 151232703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151234197 151234496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151236558 151236763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151239130 151239178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151239955 151240039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151242123 151242269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151242438 151242567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151246920 151246965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151247863 151247865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1569 nt):
ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTTTGATCCCGCGGTCCCTTCCT
GTACCTTGTCCTCAGCAGCATCTGGAATCAAGAGACCCATGGCATCTGAGGTGCCTTATGCCTCTGGCAT
GCCCATCAAGAAAATAGGCCATAGAAGTGTTGATTCCTCAGGAGAGACAACATATAAAAAGACAACCTCA
TCAGCCTTGAAAGGTGCCATCCAGTTAGGCATTACCCACACTGTGGGGAGCCTGAGTACCAAACCAGAGC
GTGATGTCCTCATGCAAGATTTCTACGTGGTTGAGAGTATCTTCTTTCCCAGTGAAGGGAGCAACCTGAC
CCCTGCTCATCACTACAATGACTTTCGTTTCAAGACCTATGCACCTGTTGCCTTCCGCTACTTCCGGGAG
CTATTTGGTATCCGGCCCGATGATTACTTGTATTCCCTCTGCAGTGAGCCGCTGATTGAACTCTGTAGCT
CTGGAGCTAGTGGTTCCCTATTCTATGTGTCCAGCGACGATGAGTTCATTATTAAGACAGTCCAACATAA
AGAGGCGGAATTTCTGCAGAAGCTGCTTCCAGGATACTACATGAACCTCAACCAGAACCCTCGGACTTTG
CTGCCTAAATTCTATGGACTGTACTGTGTGCAGGCAGGTGGCAAGAACATTCGGATTGTGGTGATGAACA
ATCTTTTACCAAGATCGGTAAAAATGCATATCAAATATGACCTCAAAGGCTCAACCTACAAACGGCGGGC
TTCCCAGAAAGAGCGAGAGAAGCCTCTTCCCACATTTAAAGACCTAGACTTCTTACAAGACATCCCTGAT
GGTCTTTTTTTGGATGCTGACATGTACAACGCTCTCTGTAAGACCCTGCAGCGTGACTGTTTGGTGCTGC
AGAGCTTCAAGATAATGGATTACAGCCTCTTGATGTCAATCCATAATATAGATCATGCACAACGAGAGCC
CTTAAGCAGTGAAACACAGTACTCAGTTGATACTCGAAGACCGGCCCCCCAAAAGGCTCTGTATTCCACA
GCCATGGAATCCATCCAGGGAGAGGCTCGACGGGGTGGTACCATGGAGACTGATGACCAGTTTGTTAAGA
AGTTGGAGCACTCTTGGAAAGCCCTGGTACATGACGGAGACACTGTCTCAGTGCATCGCCCAGGCTTCTA
CGCTGAACGGTTCCAGCGCTTCATGTGCAACACAGTATTTAAGAAGATTCCCTTGAAGCCTTCTCCTTCC
AAAAAGTTTCGGTCTGGCTCATCTTTCTCTCGGCGAGCAGGCTCCAGTGGCAACTCCTGCATTACTTACC
AGCCATCGGTCTCTGGGGAACACAAGGCACAAGTGACAACAAAGGCAGAAGTGGAGCCAGGCGTTCACCT
TGGTCGTCCTGATGTTTTACCTCAGACTCCACCTTTGGAGGAAATCAGTGAGGGCTCGCCTATTCCTGAC
CCCAGTTTCTCACCTCTAGTTGGAGAGACTTTGCAAATGCTAACTACAAGTACAACCTTGGAAAAGCTTG
AAGTTGCAGAGTCAGAGTTCACCCATTAA

Translation (522 aa):
MASASSGPSSSVGFSSFDPAVPSCTLSSAASGIKRPMASEVPYASGMPIKKIGHRSVDSSGETTYKKTTS
SALKGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYNDFRFKTYAPVAFRYFRE
LFGIRPDDYLYSLCSEPLIELCSSGASGSLFYVSSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTL
LPKFYGLYCVQAGGKNIRIVVMNNLLPRSVKMHIKYDLKGSTYKRRASQKEREKPLPTFKDLDFLQDIPD
GLFLDADMYNALCKTLQRDCLVLQSFKIMDYSLLMSIHNIDHAQREPLSSETQYSVDTRRPAPQKALYST
AMESIQGEARRGGTMETDDQFVKKLEHSWKALVHDGDTVSVHRPGFYAERFQRFMCNTVFKKIPLKPSPS
KKFRSGSSFSRRAGSSGNSCITYQPSVSGEHKAQVTTKAEVEPGVHLGRPDVLPQTPPLEEISEGSPIPD
PSFSPLVGETLQMLTTSTTLEKLEVAESEFTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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