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Report for CCDS47709.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47709.1 Public Homo sapiens 7 STRIP2 24 110 108 CCDS HistoryNCBI Gene:57464Re-query CCDS DB by CCDS ID:47709.1Re-query CCDS DB by GeneID:57464See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47709.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435494.2 ENSP00000392393.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435494.2Link to Ensembl Protein Viewer:ENSP00000392393.2Re-query CCDS DB by Nucleotide ID:ENST00000435494Re-query CCDS DB by Protein ID:ENSP00000392393
Original member Current member NCBI NM_001134336.2 NP_001127808.1 Accepted alive Link to Nucleotide Sequence:NM_001134336.2Link to Protein Sequence:NP_001127808.1Re-query CCDS DB by Nucleotide ID:NM_001134336Re-query CCDS DB by Protein ID:NP_001127808Link to BLAST:NP_001127808.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127808.1 758 Q9ULQ0-2 758 100% 0 0

Chromosomal Locations for CCDS 47709.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 129434473 129434601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129440022 129440091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129444024 129444098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129451613 129451747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129453227 129453347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129454142 129454210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129454421 129454527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129455244 129455371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129456439 129456642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129458215 129458450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129458712 129458777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129459517 129459580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129460301 129460372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129462966 129463040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129464044 129464141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129464612 129464738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129467350 129467450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129470649 129470715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129480785 129480889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 129482842 129483069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2277 nt):
ATGGAGGACCCCGCCGCGCCTGGGACCGGGGGCCCGCCCGCAAATGGCAATGGCAACGGCGGCGGCAAAG
GGAAGCAGGCGGCGCCCAAGGGCCGCGAAGCGTTCCGAAGCCAGCGGCGGGAGTCAGAGGGCTCTGTGGA
CTGTCCCACTCTGGAGTTTGAGTATGGAGATGCAGATGGGCATGCAGCCGAGTTGTCAGAATTGTATAGT
TACACTGAGAACCTGGAATTCACCAATAACAGGAGGTGCTTTGAAGAAGATTTCAAGACTCAAGTGCAGG
GCAAGGAATGGCTGGAGTTGGAAGAAGATGCCCAAAAGGCCTATATAATGGGACTCTTGGACCGGCTAGA
GGTGGTCAGTAGGGAACGGCGGCTGAAGGTGGCCCGGGCTGTTCTCTACCTGGCCCAAGGTACTTTTGGG
GAATGTGATTCAGAGGTCGATGTGCTACACTGGTCCAGGTACAACTGCTTCCTGCTGTATCAGATGGGGA
CCTTCTCCACCTTCCTGGAGCTACTCCACATGGAAATTGACAACAGCCAGGCCTGTAGCAGTGCCCTTCG
GAAACCAGCTGTCTCCATAGCTGATAGCACAGAGCTCAGGGTGCTGCTGAGTGTTATGTACCTAATGGTG
GAAAATATTCGCCTGGAGCGAGAGACAGACCCCTGTGGGTGGAGAACAGCCCGGGAGACCTTCCGCACTG
AATTAAGCTTCTCCATGCATAATGAGGAGCCTTTTGCCCTTTTACTCTTCTCCATGGTTACCAAGTTCTG
CAGTGGCCTGGCTCCTCACTTCCCCATAAAGAAGGTCCTGCTCCTGCTCTGGAAGGTGGTCATGTTTACC
CTCGGTGGATTTGAGCATCTGCAGACTCTCAAAGTACAGAAGCGGGCAGAATTGGGCCTGCCTCCACTGG
CTGAAGACAGTATCCAGGTGGTGAAGAGCATGCGTGCTGCCTCCCCGCCCTCTTACACTCTTGACCTGGG
AGAGTCTCAGCTGGCACCCCCACCCTCCAAGCTGCGAGGCCGCCGTGGCTCTCGAAGGCAACTCCTCACT
AAGCAGGACAGCCTGGACATCTACAATGAAAGGGATCTCTTCAAGACTGAGGAGCCCGCCACAGAGGAGG
AAGAGGAGTCTGCTGGTGATGGAGAACGAACCTTGGATGGAGAGCTAGACCTGCTAGAGCAGGACCCTCT
GGTGCCACCTCCACCCTCACAGGCACCCCTCTCTGCTGAGCGGGTGGCTTTTCCCAAGGGCCTGCCCTGG
GCCCCAAAGGTCAGACAGAAGGACATTGAGCACTTCTTGGAGATGAGCAGGAACAAGTTCATCGGATTCA
CCCTGGGGCAGGACACAGATACATTGGTTGGATTACCCAGGCCCATCCATGAGAGTGTGAAGACCCTAAA
GCAGCACAAGTATATCTCCATCGCAGATGTGCAGATCAAGAATGAAGAGGAGCTGGAGAAGTGCCCTATG
TCTTTGGGGGAAGAGGTGGTACCAGAGACGCCATGTGAAATCCTCTACCAGGGAATGCTGTACAGCCTTC
CGCAGTATATGATCGCTCTGCTTAAGATTCTGCTGGCTGCAGCTCCCACCTCTAAGGCTAAGACAGACTC
TATCAATATCCTGGCAGATGTCCTACCTGAGGAGATGCCCATCACTGTTCTCCAGAGCATGAAGCTGGGC
ATCGATGTGAACAGGCACAAGGAGATTATTGTAAAGAGTATCTCTACCCTGCTTCTGCTACTCCTCAAAC
ACTTCAAACTCAACCATATCTACCAGTTTGAATATGTATCGCAACATTTGGTATTTGCCAACTGCATCCC
CTTGATCCTGAAGTTCTTCAATCAAAATATCTTGTCATACATCACTGCCAAAAACAGCATCTCAGTCCTG
GATTATCCTTGCTGTACCATCCAGGATTTGCCGGAGCTTACTACTGAAAGTCTGGAAGCTGGAGACAACA
GCCAGTTCTGCTGGAGGAACCTCTTTTCCTGCATCAACCTCCTGAGGCTGCTCAATAAACTGACCAAATG
GAAACATTCCCGGACCATGATGCTGGTAGTGTTTAAATCGGCACCAATCTTAAAGCGGGCCCTCAAGGTC
AAACAGGCCATGCTGCAACTTTATGTCCTAAAGCTACTAAAGTTACAGACCAAGTACCTGGGGCGCCAAT
GGAGGAAAAGCAACATGAAAACCATGTCAGCCATTTACCAGAAAGTGCGTCACCGCATGAACGATGACTG
GGCTTACGGGAATGGTGAGTCTTCCCAAAGCTCTTGA

Translation (758 aa):
MEDPAAPGTGGPPANGNGNGGGKGKQAAPKGREAFRSQRRESEGSVDCPTLEFEYGDADGHAAELSELYS
YTENLEFTNNRRCFEEDFKTQVQGKEWLELEEDAQKAYIMGLLDRLEVVSRERRLKVARAVLYLAQGTFG
ECDSEVDVLHWSRYNCFLLYQMGTFSTFLELLHMEIDNSQACSSALRKPAVSIADSTELRVLLSVMYLMV
ENIRLERETDPCGWRTARETFRTELSFSMHNEEPFALLLFSMVTKFCSGLAPHFPIKKVLLLLWKVVMFT
LGGFEHLQTLKVQKRAELGLPPLAEDSIQVVKSMRAASPPSYTLDLGESQLAPPPSKLRGRRGSRRQLLT
KQDSLDIYNERDLFKTEEPATEEEEESAGDGERTLDGELDLLEQDPLVPPPPSQAPLSAERVAFPKGLPW
APKVRQKDIEHFLEMSRNKFIGFTLGQDTDTLVGLPRPIHESVKTLKQHKYISIADVQIKNEEELEKCPM
SLGEEVVPETPCEILYQGMLYSLPQYMIALLKILLAAAPTSKAKTDSINILADVLPEEMPITVLQSMKLG
IDVNRHKEIIVKSISTLLLLLLKHFKLNHIYQFEYVSQHLVFANCIPLILKFFNQNILSYITAKNSISVL
DYPCCTIQDLPELTTESLEAGDNSQFCWRNLFSCINLLRLLNKLTKWKHSRTMMLVVFKSAPILKRALKV
KQAMLQLYVLKLLKLQTKYLGRQWRKSNMKTMSAIYQKVRHRMNDDWAYGNGESSQSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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