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Report for CCDS50563.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50563.1 Public Mus musculus 2 Abl1 23 108 98 CCDS HistoryNCBI Gene:11350Re-query CCDS DB by CCDS ID:50563.1Re-query CCDS DB by GeneID:11350See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50563.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075759.12 ENSMUSP00000075167.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075759.12Link to Ensembl Protein Viewer:ENSMUSP00000075167.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000075759Re-query CCDS DB by Protein ID:ENSMUSP00000075167
Original member Current member NCBI NM_001112703.2 NP_001106174.1 Accepted alive Link to Nucleotide Sequence:NM_001112703.2Link to Protein Sequence:NP_001106174.1Re-query CCDS DB by Nucleotide ID:NM_001112703Re-query CCDS DB by Protein ID:NP_001106174Link to BLAST:NP_001106174.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001106174.1 1142 P00520-4 1142 100% 0 0

Chromosomal Locations for CCDS 50563.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 31689807 31689942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31778334 31778507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31778921 31779216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31784507 31784779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31790271 31790355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31790662 31790839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31792238 31792422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31794542 31794694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31796973 31797062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31797563 31797727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31800206 31801899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3429 nt):
ATGGGGCAGCAGCCTGGAAAAGTTCTTGGGGACCAAAGAAGGCCTAGTTTGCCCGCCCTGCATTTTATCA
AAGGGGCAGGGAAGAGGGACTCATCGAGGCATGGGGGCCCACACTGCAATGTCTTTGTGGAACACGAAGC
CCTGCAGAGGCCAGTGGCATCTGACTTTGAGCCCCAGGGTCTCAGCGAAGCAGCTCGATGGAACTCCAAG
GAAAACCTTCTTGCTGGGCCCAGTGAAAATGACCCCAACCTTTTTGTGGCACTCTATGATTTTGTGGCCA
GTGGAGATAACACTCTCAGCATCACTAAAGGTGAAAAGCTCCGGGTCTTGGGTTATAATCACAATGGGGA
ATGGTGTGAAGCCCAAACGAAAAATGGCCAAGGATGGGTCCCAAGCAACTACATCACCCCCGTCAACAGC
CTGGAGAAACATTCCTGGTATCATGGCCCTGTATCTCGGAATGCTGCTGAGTATCTGCTGAGCAGCGGAA
TCAACGGCAGCTTCTTAGTGCGGGAGAGTGAGAGTAGCCCTGGCCAGAGATCCATCTCGCTGCGGTATGA
AGGGAGGGTGTACCACTACAGGATCAACACTGCCTCTGATGGCAAGCTGTACGTGTCCTCCGAGAGCCGC
TTCAACACTCTGGCTGAGTTAGTTCACCATCACTCCACGGTGGCTGATGGCCTCATCACCACACTCCACT
ACCCAGCTCCCAAGCGCAACAAGCCCACTATCTACGGTGTGTCCCCCAACTACGACAAGTGGGAAATGGA
GCGCACCGACATCACCATGAAGCACAAGTTGGGTGGAGGCCAGTACGGGGAGGTGTACGAGGGCGTTTGG
AAGAAGTACAGCCTCACTGTGGCCGTGAAGACCTTGAAGGAGGACACCATGGAGGTGGAGGAGTTCCTGA
AGGAAGCGGCGGTGATGAAGGAGATCAAACACCCTAACCTGGTGCAGCTGCTAGGGGTGTGTACCCGGGA
ACCACCATTCTACATAATCACTGAGTTCATGACCTATGGGAACCTGCTGGACTACCTGAGGGAGTGTAAC
CGGCAGGAGGTGAGCGCCGTGGTACTGCTCTACATGGCCACACAGATCTCATCAGCCATGGAGTACTTGG
AGAAGAAGAACTTCATCCACAGAGACCTTGCTGCCCGGAACTGCCTGGTAGGGGAAAACCACTTGGTGAA
GGTGGCTGATTTTGGCCTGAGCAGGTTGATGACAGGGGACACCTACACGGCCCATGCTGGAGCCAAATTC
CCCATCAAATGGACCGCACCTGAGAGCCTGGCCTACAACAAGTTCTCCATCAAGTCGGACGTGTGGGCAT
TTGGAGTATTGCTCTGGGAGATTGCTACCTATGGCATGTCACCTTACCCGGGAATTGACCTGTCTCAGGT
TTATGAGCTGCTGGAAAAAGACTACCGCATGGAGCGCCCTGAAGGCTGCCCGGAGAAGGTCTACGAGCTC
ATGCGAGCATGTTGGCAGTGGAACCCCTCTGACCGGCCCTCCTTTGCTGAAATCCACCAAGCCTTTGAAA
CCATGTTCCAGGAATCCAGTATCTCAGATGAGGTGGAGAAGGAGCTGGGGAAACGAGGCACGAGAGGAGG
TGCTGGGAGTATGCTGCAGGCCCCAGAGCTGCCCACCAAGACCAGAACCTGCAGGAGAGCAGCTGAGCAG
AAAGATGCGCCTGACACCCCTGAGCTGCTCCACACGAAGGGCCTGGGAGAAAGCGATGCACTGGACAGTG
AGCCTGCTGTATCGCCACTGCTTCCTCGGAAAGAGCGCGGGCCCCCAGACGGCAGCCTAAATGAAGATGA
GCGCCTTCTCCCCAGAGACAGAAAGACCAACCTGTTCAGCGCTTTGATCAAGAAGAAGAAGAAAATGGCG
CCGACGCCCCCTAAGCGCAGCAGTTCCTTCCGAGAGATGGATGGCCAGCCAGACCGCAGAGGGGCTAGTG
AGGATGACAGCAGGGAACTCTGCAATGGACCACCAGCTCTCACCTCAGACGCAGCAGAGCCTACCAAGTC
CCCAAAGGCCAGCAATGGGGCTGGCGTCCCTAATGGAGCCTTCCGGGAGCCGGGCAACTCAGGCTTCCGT
TCTCCCCACATGTGGAAAAAGTCCAGCACACTGACCGGGAGCCGCCTGGCTGCTGCCGAAGAGGAGAGCG
GCATGAGCTCCAGTAAGCGCTTCCTGCGTTCTTGTTCGGCCTCCTGCATGCCCCATGGGGCAAGGGACAC
AGAGTGGCGGTCGGTCACGCTGCCTCGAGACCTGCCGTCTGCTGGCAAGCAGTTTGACTCATCCACCTTT
GGAGGGCACAAAAGCGAAAAGCCAGCTCTGCCTCGGAAACGCACCAGTGAGAGCAGGTCTGAGCAGGTGG
CCAAAAGCACGGCGATGCCCCCTCCCCGGCTGGTGAAGAAGAACGAGGAGGCTGCTGAAGAAGGCTTCAA
AGACACAGAATCCAGCCCTGGCTCCAGCCCTCCCAGCTTGACTCCCAAACTCCTCCGCAGGCAGGTCACT
GCCTCTCCTTCCTCTGGCCTCTCTCACAAGGAAGAGGCCACCAAGGGCAGTGCCTCAGGCATGGGGACTC
CGGCCACTGCAGAGCCAGCACCCCCCAGCAACAAAGTGGGCCTCAGCAAGGCCTCCTCTGAGGAGATGCG
CGTAAGGAGGCACAAGCACAGCTCGGAGTCCCCAGGGAGAGACAAGGGGCGACTGGCTAAGCTCAAGCCT
GCCCCGCCGCCTCCTCCTGCCTGCACAGGAAAAGCAGGCAAGCCCGCACAGAGCCCCAGCCAAGAGGCCG
GGGAGGCAGGGGGGCCCACAAAGACAAAATGCACGAGTCTGGCTATGGATGCTGTGAACACTGACCCCAC
CAAGGCCGGCCCACCTGGAGAAGGACTGAGAAAGCCTGTGCCCCCATCTGTGCCAAAGCCCCAGTCGACG
GCTAAGCCTCCAGGGACTCCCACCAGCCCGGTCTCCACCCCCTCCACAGCACCAGCTCCTTCACCCCTGG
CTGGGGACCAGCAGCCATCTTCTGCCGCCTTCATCCCCCTCATATCAACCCGTGTGTCTCTTAGGAAGAC
CCGCCAGCCGCCAGAGCGCATTGCCAGTGGCACCATCACCAAGGGTGTGGTTCTGGACAGTACTGAGGCC
CTGTGCCTTGCCATCTCCCGGAACTCAGAGCAGATGGCCAGCCACAGTGCTGTACTGGAGGCTGGCAAGA
ACCTGTACACTTTCTGTGTGAGCTATGTGGACTCTATCCAGCAGATGAGGAACAAGTTTGCCTTCCGTGA
GGCTATCAACAAGCTGGAGAGCAACCTCCGAGAGCTGCAGATCTGCCCTGCCACAGCCTCCAGTGGGCCA
GCTGCCACCCAAGACTTCAGCAAGCTGCTCAGCTCTGTGAAGGAGATCAGCGACATTGTCCGGAGGTAG

Translation (1142 aa):
MGQQPGKVLGDQRRPSLPALHFIKGAGKRDSSRHGGPHCNVFVEHEALQRPVASDFEPQGLSEAARWNSK
ENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNS
LEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR
FNTLAELVHHHSTVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVW
KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN
RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF
PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYEL
MRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKRGTRGGAGSMLQAPELPTKTRTCRRAAEQ
KDAPDTPELLHTKGLGESDALDSEPAVSPLLPRKERGPPDGSLNEDERLLPRDRKTNLFSALIKKKKKMA
PTPPKRSSSFREMDGQPDRRGASEDDSRELCNGPPALTSDAAEPTKSPKASNGAGVPNGAFREPGNSGFR
SPHMWKKSSTLTGSRLAAAEEESGMSSSKRFLRSCSASCMPHGARDTEWRSVTLPRDLPSAGKQFDSSTF
GGHKSEKPALPRKRTSESRSEQVAKSTAMPPPRLVKKNEEAAEEGFKDTESSPGSSPPSLTPKLLRRQVT
ASPSSGLSHKEEATKGSASGMGTPATAEPAPPSNKVGLSKASSEEMRVRRHKHSSESPGRDKGRLAKLKP
APPPPPACTGKAGKPAQSPSQEAGEAGGPTKTKCTSLAMDAVNTDPTKAGPPGEGLRKPVPPSVPKPQST
AKPPGTPTSPVSTPSTAPAPSPLAGDQQPSSAAFIPLISTRVSLRKTRQPPERIASGTITKGVVLDSTEA
LCLAISRNSEQMASHSAVLEAGKNLYTFCVSYVDSIQQMRNKFAFREAINKLESNLRELQICPATASSGP
AATQDFSKLLSSVKEISDIVRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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