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Report for CCDS9666.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9666.1 Public Homo sapiens 14 SSTR1 24 110 108 CCDS HistoryNCBI Gene:6751Re-query CCDS DB by CCDS ID:9666.1Re-query CCDS DB by GeneID:6751See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9666.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267377.3 ENSP00000267377.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267377.3Link to Ensembl Protein Viewer:ENSP00000267377.2Re-query CCDS DB by Nucleotide ID:ENST00000267377Re-query CCDS DB by Protein ID:ENSP00000267377
Original member Current member NCBI NM_001049.3 NP_001040.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001049.3Link to Protein Sequence:NP_001040.1Re-query CCDS DB by Nucleotide ID:NM_001049Re-query CCDS DB by Protein ID:NP_001040Link to BLAST:NP_001040.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001040.1 391 P30872 391 100% 0 0

Chromosomal Locations for CCDS 9666.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 38209390 38210565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1176 nt):
ATGTTCCCCAATGGCACCGCCTCCTCTCCTTCCTCCTCTCCTAGCCCCAGCCCGGGCAGCTGCGGCGAAG
GCGGCGGCAGCAGGGGCCCCGGGGCCGGCGCTGCGGACGGCATGGAGGAGCCAGGGCGAAATGCGTCCCA
GAACGGGACCTTGAGCGAGGGCCAGGGCAGCGCCATCCTGATCTCTTTCATCTACTCCGTGGTGTGCCTG
GTGGGGCTGTGTGGGAACTCTATGGTCATCTACGTGATCCTGCGCTATGCCAAGATGAAGACGGCCACCA
ACATCTACATCCTAAATCTGGCCATTGCTGATGAGCTGCTCATGCTCAGCGTGCCCTTCCTAGTCACCTC
CACGTTGTTGCGCCACTGGCCCTTCGGTGCGCTGCTCTGCCGCCTCGTGCTCAGCGTGGACGCGGTCAAC
ATGTTCACCAGCATCTACTGTCTGACTGTGCTCAGCGTGGACCGCTACGTGGCCGTGGTGCATCCCATCA
AGGCGGCCCGCTACCGCCGGCCCACCGTGGCCAAGGTAGTAAACCTGGGCGTGTGGGTGCTATCGCTGCT
CGTCATCCTGCCCATCGTGGTCTTCTCTCGCACCGCGGCCAACAGCGACGGCACGGTGGCTTGCAACATG
CTCATGCCAGAGCCCGCTCAACGCTGGCTGGTGGGCTTCGTGTTGTACACATTTCTCATGGGCTTCCTGC
TGCCCGTGGGGGCTATCTGCCTGTGCTACGTGCTCATCATTGCTAAGATGCGCATGGTGGCCCTCAAGGC
CGGCTGGCAGCAGCGCAAGCGCTCGGAGCGCAAGATCACCTTAATGGTGATGATGGTGGTGATGGTGTTT
GTCATCTGCTGGATGCCTTTCTACGTGGTGCAGCTGGTCAACGTGTTTGCTGAGCAGGACGACGCCACGG
TGAGTCAGCTGTCGGTCATCCTCGGCTATGCCAACAGCTGCGCCAACCCCATCCTCTATGGCTTTCTCTC
AGACAACTTCAAGCGCTCTTTCCAACGCATCCTATGCCTCAGCTGGATGGACAACGCCGCGGAGGAGCCG
GTTGACTATTACGCCACCGCGCTCAAGAGCCGTGCCTACAGTGTGGAAGACTTCCAACCTGAGAACCTGG
AGTCCGGCGGCGTCTTCCGTAATGGCACCTGCACGTCCCGGATCACGACGCTCTGA

Translation (391 aa):
MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRNASQNGTLSEGQGSAILISFIYSVVCL
VGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSVPFLVTSTLLRHWPFGALLCRLVLSVDAVN
MFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLLVILPIVVFSRTAANSDGTVACNM
LMPEPAQRWLVGFVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMVVMVF
VICWMPFYVVQLVNVFAEQDDATVSQLSVILGYANSCANPILYGFLSDNFKRSFQRILCLSWMDNAAEEP
VDYYATALKSRAYSVEDFQPENLESGGVFRNGTCTSRITTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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