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Report for CCDS35410.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35410.1 Public Homo sapiens X ATP11C 24 110 108 CCDS HistoryNCBI Gene:286410Re-query CCDS DB by CCDS ID:35410.1Re-query CCDS DB by GeneID:286410See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35410.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361648.6 ENSP00000355165.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361648.6Link to Ensembl Protein Viewer:ENSP00000355165.2Re-query CCDS DB by Nucleotide ID:ENST00000361648Re-query CCDS DB by Protein ID:ENSP00000355165
Original member Current member NCBI NM_001010986.3 NP_001010986.2 Accepted alive Link to Nucleotide Sequence:NM_001010986.3Link to Protein Sequence:NP_001010986.2Re-query CCDS DB by Nucleotide ID:NM_001010986Re-query CCDS DB by Protein ID:NP_001010986Link to BLAST:NP_001010986.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010986.2 1119 Q8NB49-3 1119 100% 0 0

Chromosomal Locations for CCDS 35410.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 139728900 139728962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139737916 139738069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139740991 139741094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139743559 139743624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139745722 139745857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139750025 139750152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139757808 139757867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139761961 139762106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139763316 139763418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139768260 139768434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139774690 139774953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139782547 139782728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139783164 139783267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139785226 139785299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139787173 139787244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139788192 139788343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139789327 139789488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139796273 139796470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139797176 139797326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139798273 139798354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139798679 139798743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139800060 139800110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139802236 139802339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139804471 139804599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139814878 139814985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139816863 139816943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139819338 139819427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139826704 139826823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139832154 139832189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3360 nt):
ATGCAGATGGTCCCATCTCTCCCTCCAGCCTCTGAGTGTGCTGGAGAAGAGAAACGAGTTGGCACACGCA
CAGTGTTTGTTGGCAATCATCCAGTTTCGGAAACAGAAGCTTACATTGCACAAAGATTTTGTGATAATAG
AATAGTCTCATCTAAGTATACACTTTGGAATTTTCTCCCAAAGAATCTGTTTGAACAGTTTAGAAGAATT
GCAAATTTTTATTTTCTCATAATCTTCCTTGTACAGGTCACAGTAGACACACCAACTAGCCCAGTTACCA
GTGGACTTCCACTTTTCTTTGTTATAACTGTTACAGCCATCAAGCAGGGATATGAGGATTGTCTGAGACA
CAGAGCTGACAATGAAGTCAACAAAAGCACTGTTTACATTATTGAAAATGCAAAGCGAGTGAGAAAAGAA
AGTGAAAAAATCAAGGTTGGTGATGTAGTAGAAGTACAGGCAGATGAAACCTTTCCCTGTGATCTTATTC
TTCTATCATCTTGCACCACTGATGGAACCTGTTATGTCACTACAGCCAGTCTTGATGGGGAATCCAATTG
CAAGACACATTATGCAGTACGTGATACCATTGCACTGTGTACAGCAGAATCCATCGATACCCTCCGAGCA
GCAATTGAATGTGAACAGCCTCAACCTGACCTCTACAAATTTGTTGGGCGAATCAATATCTACAGTAATA
GTCTTGAGGCTGTTGCCAGGTCTTTGGGACCTGAAAATCTCTTGCTGAAAGGAGCTACGCTAAAAAATAC
CGAGAAGATATATGGAGTTGCTGTTTACACTGGAATGGAAACCAAAATGGCTTTGAACTACCAAGGGAAA
TCTCAGAAACGTTCTGCTGTTGAAAAATCTATTAATGCTTTCCTGATTGTATATTTATTTATCTTACTGA
CCAAAGCTGCAGTATGCACTACTCTAAAGTATGTTTGGCAAAGTACCCCATACAATGATGAACCTTGGTA
TAACCAAAAGACTCAGAAAGAGCGAGAGACCTTGAAGGTTTTAAAAATGTTCACCGACTTCCTATCATTT
ATGGTTCTATTCAACTTTATCATTCCTGTCTCCATGTACGTCACAGTAGAAATGCAGAAATTCTTGGGCT
CCTTCTTCATCTCATGGGATAAGGACTTTTATGATGAAGAAATTAATGAAGGAGCCCTGGTTAACACATC
AGACCTTAATGAAGAACTTGGTCAGGTGGATTATGTATTTACAGATAAGACTGGAACACTCACTGAAAAC
AGCATGGAATTCATTGAATGCTGCATAGATGGCCACAAATATAAAGGTGTAACTCAAGAGGTTGATGGAT
TATCTCAAACTGATGGAACTTTAACATATTTTGACAAAGTAGATAAGAATCGAGAAGAGCTGTTTCTACG
TGCCTTGTGTTTATGTCATACTGTAGAAATCAAAACAAACGATGCTGTTGATGGAGCTACAGAATCAGCT
GAATTAACCTATATCTCCTCTTCACCAGATGAAATAGCTTTGGTGAAAGGAGCTAAAAGGTACGGGTTCA
CATTTTTAGGAAATCGAAATGGATATATGAGAGTAGAGAACCAAAGAAAAGAAATAGAAGAATATGAACT
TCTTCACACCTTAAACTTTGATGCTGTCCGGCGACGTATGAGTGTAATTGTGAAGACTCAAGAAGGAGAC
ATACTTCTCTTTTGTAAAGGAGCAGACTCGGCAGTTTTTCCCAGAGTGCAAAATCATGAAATTGAGTTAA
CTAAAGTCCATGTGGAACGTAATGCAATGGATGGGTATCGGACACTCTGTGTAGCCTTCAAAGAAATTGC
TCCAGATGATTATGAAAGAATTAACAGACAGCTCATAGAGGCAAAAATGGCCTTACAAGACAGAGAAGAA
AAAATGGAAAAAGTTTTCGATGATATTGAGACAAACATGAATTTAATTGGAGCCACTGCAGTTGAAGACA
AGCTACAAGATCAAGCTGCAGAGACCATTGAAGCTCTGCATGCAGCAGGCCTGAAAGTCTGGGTGCTCAC
TGGGGACAAGATGGAGACAGCTAAATCCACATGCTATGCCTGCCGCCTTTTCCAGACCAACACTGAGCTC
TTAGAACTAACCACAAAAACCATTGAAGAAAGTGAAAGGAAAGAAGATCGATTACATGAATTATTGATAG
AATATCGCAAGAAATTGCTGCATGAGTTTCCTAAAAGTACTAGAAGCTTTAAAAAAGCATGGACAGAACA
TCAGGAATATGGATTAATCATAGATGGCTCCACATTGTCACTCATACTAAATTCTAGTCAAGACTCTAGT
TCAAACAATTACAAAAGCATTTTCCTACAAATATGTATGAAGTGTACTGCAGTGCTCTGCTGTCGGATGG
CACCATTACAGAAAGCCCAGATTGTCAGAATGGTGAAGAATTTAAAAGGCAGCCCAATAACTCTGTCGAT
AGGTGATGGTGCCAATGATGTTAGTATGATCTTGGAATCCCATGTGGGAATAGGTATTAAAGGCAAAGAA
GGTCGCCAAGCAGCTAGGAATAGCGATTATTCTGTTCCAAAGTTTAAACACTTAAAGAAACTGCTGTTGG
CTCATGGACATCTATATTATGTGAGAATAGCACACCTTGTACAGTACTTCTTCTATAAGAACCTTTGTTT
CATTTTGCCACAGTTTTTGTACCAGTTCTTCTGTGGATTCTCACAACAGCCACTGTATGATGCTGCTTAC
CTTACAATGTACAATATCTGCTTCACATCCTTGCCCATCCTGGCCTATAGTCTACTGGAACAGCACATCA
ACATTGACACTCTGACCTCAGATCCCCGATTGTATATGAAAATTTCTGGCAATGCCATGCTACAGTTGGG
CCCCTTCTTATATTGGACATTTCTGGCTGCCTTTGAAGGGACAGTGTTCTTCTTTGGGACTTACTTTCTT
TTTCAGACTGCATCCCTAGAAGAAAATGGAAAGGTATACGGAAACTGGACTTTTGGAACCATTGTTTTTA
CAGTCTTAGTATTCACTGTAACCCTGAAGCTTGCCTTGGATACCCGATTCTGGACGTGGATAAATCACTT
TGTGATTTGGGGTTCTTTAGCCTTCTATGTATTTTTCTCATTCTTCTGGGGAGGAATTATTTGGCCTTTT
CTCAAGCAACAGAGAATGTATTTTGTATTTGCCCAAATGCTGTCTTCTGTATCCACATGGTTGGCTATAA
TTCTTCTAATATTTATCAGCCTGTTCCCTGAGATTCTTCTGATAGTATTAAAGAATGTAAGAAGAAGAAG
TGCCAGGAATCCGAATCTTGAACTGCCTATGTTATTGTCCTACAAGCATACTGACAGTGGTTACAGCTAA

Translation (1119 aa):
MQMVPSLPPASECAGEEKRVGTRTVFVGNHPVSETEAYIAQRFCDNRIVSSKYTLWNFLPKNLFEQFRRI
ANFYFLIIFLVQVTVDTPTSPVTSGLPLFFVITVTAIKQGYEDCLRHRADNEVNKSTVYIIENAKRVRKE
SEKIKVGDVVEVQADETFPCDLILLSSCTTDGTCYVTTASLDGESNCKTHYAVRDTIALCTAESIDTLRA
AIECEQPQPDLYKFVGRINIYSNSLEAVARSLGPENLLLKGATLKNTEKIYGVAVYTGMETKMALNYQGK
SQKRSAVEKSINAFLIVYLFILLTKAAVCTTLKYVWQSTPYNDEPWYNQKTQKERETLKVLKMFTDFLSF
MVLFNFIIPVSMYVTVEMQKFLGSFFISWDKDFYDEEINEGALVNTSDLNEELGQVDYVFTDKTGTLTEN
SMEFIECCIDGHKYKGVTQEVDGLSQTDGTLTYFDKVDKNREELFLRALCLCHTVEIKTNDAVDGATESA
ELTYISSSPDEIALVKGAKRYGFTFLGNRNGYMRVENQRKEIEEYELLHTLNFDAVRRRMSVIVKTQEGD
ILLFCKGADSAVFPRVQNHEIELTKVHVERNAMDGYRTLCVAFKEIAPDDYERINRQLIEAKMALQDREE
KMEKVFDDIETNMNLIGATAVEDKLQDQAAETIEALHAAGLKVWVLTGDKMETAKSTCYACRLFQTNTEL
LELTTKTIEESERKEDRLHELLIEYRKKLLHEFPKSTRSFKKAWTEHQEYGLIIDGSTLSLILNSSQDSS
SNNYKSIFLQICMKCTAVLCCRMAPLQKAQIVRMVKNLKGSPITLSIGDGANDVSMILESHVGIGIKGKE
GRQAARNSDYSVPKFKHLKKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAY
LTMYNICFTSLPILAYSLLEQHINIDTLTSDPRLYMKISGNAMLQLGPFLYWTFLAAFEGTVFFFGTYFL
FQTASLEENGKVYGNWTFGTIVFTVLVFTVTLKLALDTRFWTWINHFVIWGSLAFYVFFSFFWGGIIWPF
LKQQRMYFVFAQMLSSVSTWLAIILLIFISLFPEILLIVLKNVRRRSARNPNLELPMLLSYKHTDSGYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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