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Report for CCDS5519.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5519.2 Public Homo sapiens 7 SEPTIN14 24 110 108 CCDS HistoryNCBI Gene:346288Re-query CCDS DB by CCDS ID:5519.2Re-query CCDS DB by GeneID:346288See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 5519.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388975.4 ENSP00000373627.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000388975.4Link to Ensembl Protein Viewer:ENSP00000373627.3Re-query CCDS DB by Nucleotide ID:ENST00000388975Re-query CCDS DB by Protein ID:ENSP00000373627
Original member Current member NCBI NM_207366.3 NP_997249.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207366.3Link to Protein Sequence:NP_997249.2Re-query CCDS DB by Nucleotide ID:NM_207366Re-query CCDS DB by Protein ID:NP_997249Link to BLAST:NP_997249.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997249.2 432 Q6ZU15 432 100% 0 0

Chromosomal Locations for CCDS 5519.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 55795913 55796092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55805258 55805390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55807090 55807258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55819127 55819223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55834425 55834586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55842942 55843128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55844523 55844718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55846517 55846637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 55861943 55861996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1299 nt):
ATGGCAGAAAGAACAATGGCTATGCCCACACAAATACCTGCTGATGGAGATACACAAAAAGAAAATAATA
TTCGTTGTTTAACTACGATTGGACATTTTGGTTTTGAATGTTTGCCCAATCAGTTGGTGAGCAGATCTAT
CCGACAAGGATTCACTTTTAATATTCTCTGTGTGGGGGAGACTGGAATTGGAAAATCGACACTGATAGAC
ACATTGTTTAATACTAACTTGAAAGATAACAAATCCTCACATTTTTACTCAAATGTTGGACTTCAAATTC
AGACATATGAACTTCAGGAAAGCAATGTTCAGTTGAAATTGACTGTTGTGGAGACAGTAGGGTATGGTGA
TCAAATAGACAAAGAAGCCAGCTACCAACCAATAGTTGACTACATAGATGCCCAATTTGAGGCCTATCTT
CAAGAAGAACTGAAGATTAAACGTTCCTTGTTTGAGTACCATGATTCTCGCGTCCACGTGTGTCTTTACT
TCATTTCACCTACAGGACATTCCCTGAAGTCTCTTGATCTATTAACAATGAAGAACCTTGACAGTAAGGT
GAATATTATACCACTGATTGCCAAAGCAGACACTATTTCTAAAAATGATTTACAGACGTTTAAGAATAAG
ATAATGAGTGAATTGATTAGCAATGGCATCCAGATATATCAGCTCCCAACAGATGAAGAAACTGCTGCTC
AAGCGAACTCCTCAGTTAGTGGGCTGTTACCCTTTGCTGTGGTAGGGAGTACAGATGAAGTGAAAGTTGG
AAAAAGGATGGTCAGAGGCCGTCACTACCCTTGGGGAGTTTTGCAAGTGGAAAATGAAAATCACTGTGAC
TTCGTTAAGCTCCGAGATATGCTTCTTTGTACCAATATGGAAAATCTAAAAGAAAAAACCCACACTCAGC
ACTATGAATGTTATAGGTACCAAAAACTGCAGAAAATGGGCTTTACAGATGTGGGTCCAAACAACCAGCC
AGTTAGTTTTCAAGAAATCTTTGAAGCCAAAAGACAAGAGTTCTATGATCAATGTCAGAGGGAAGAAGAA
GAGTTGAAACAGAGATTTATGCAGCGAGTCAAGGAGAAAGAAGCAACATTTAAAGAAGCTGAAAAAGAGC
TGCAGGACAAGTTCGAGCATCTTAAAATGATTCAACAGGAGGAGATAAGGAAGCTCGAGGAAGAGAAAAA
ACAACTGGAAGGAGAAATCATAGATTTTTATAAAATGAAAGCTGCCTCCGAAGCACTGCAGACTCAGCTG
AGCACCGATACAAAGAAAGACAAACATCGTAAGAAATAA

Translation (432 aa):
MAERTMAMPTQIPADGDTQKENNIRCLTTIGHFGFECLPNQLVSRSIRQGFTFNILCVGETGIGKSTLID
TLFNTNLKDNKSSHFYSNVGLQIQTYELQESNVQLKLTVVETVGYGDQIDKEASYQPIVDYIDAQFEAYL
QEELKIKRSLFEYHDSRVHVCLYFISPTGHSLKSLDLLTMKNLDSKVNIIPLIAKADTISKNDLQTFKNK
IMSELISNGIQIYQLPTDEETAAQANSSVSGLLPFAVVGSTDEVKVGKRMVRGRHYPWGVLQVENENHCD
FVKLRDMLLCTNMENLKEKTHTQHYECYRYQKLQKMGFTDVGPNNQPVSFQEIFEAKRQEFYDQCQREEE
ELKQRFMQRVKEKEATFKEAEKELQDKFEHLKMIQQEEIRKLEEEKKQLEGEIIDFYKMKAASEALQTQL
STDTKKDKHRKK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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