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Report for CCDS14490.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
14490.1 |
Public |
Homo sapiens |
X |
ARMCX2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9823](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:14490.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9823](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 14490.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000330154.6 |
ENSP00000328631.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000330154.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000328631.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000330154](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000328631](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000328766.9 |
ENSP00000331662.5 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000328766.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000331662.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000328766](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000331662](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000356824.9 |
ENSP00000349281.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000356824.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000349281.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000356824](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000349281](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001282231.2 |
NP_001269160.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001282231.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001269160.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001282231](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001269160](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001269160.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_014782.7 |
NP_055597.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_014782.7](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_055597.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_014782](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_055597](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_055597.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_177949.4 |
NP_808818.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_177949.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_808818.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_177949](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_808818](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_808818.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 14490.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1899 nt): ATGAGCCGCGTTCGGGATGCTGGCTGTGTAGCGGCGGGGATAGTGATAGGGGCTGGTGCCTGGTACTGTG TCTACAAATACACCAGGGGGAGAGACCAGACCAAGAAGAGAATGGCCAAGCCCAAAAACCGGGCTGTGGC TGGGACTGGAGCCAGGGCTAGAGCTGGGCTAAGAGCCGGATTCACAATCGACCTTGGGTCAGGATTCAGT CCCCCAACCCCAGTCCGTGCTGAAGCAGAGGACAGGGCCCAGGATGAAGCCTCTGCTCTGGACACAGTTG GAGCTGAGGCAGTGGCCCCAGCTGCATCCAGCGCTGAGGCTCAGAGTGGGGCAGGCAGTCAGGCCCAAGA GGCAGATGGAGCCGGGGTTGGGCCTAAGGCCGAATCAGTAGTTGGGGCTGCAATGGCTTCTGCAATAGCA CCACCTCCCGGGGTGACAGAGGCCCTTGGGGCTGCAGAAGCCCCTGCAATGGCAGGGGCTCCCAAAGTGG CAGAAGCTCCCAGAGAAGCGGAGACTTCCAGGGCAGCGGTGCCTCCTGGGACAGTGGTGCCTACCGAAGC GGCAGCACCCACTGAGGTGACCGAGGGTCCTGGGGTAGCAGCACCTACCAAGGTAGCTGAAGCTCCCGGG GTGGCATCGCCTACCGAGGCAGCTGAGGCTCCTGTGCCGGCAACGCCTACTGGGGCTGCAGCACCTACTG GGGCTGCAGAGTCTCCTGGAACTTCTGGTTCCCCTAGAACAGCGGTGGTTCCTGGAACATCAGCTGCCAA GAAAGCAACCCCTGGGGCTCACACTGGGGCTATACCGAAAGCCACATCAGCGACTGGAGCGGTACCCAAA GGTGGAGGCAAGGGTGTAACCAGGTCCCGGAATGGGGGCAAGGGCAAGGGCAAGAAAAGCAAAGTTGAAG TAGACGAACTGGGGATGGGCTTCCGTCCTGGAGATGGGGCTGCAGCAGCTGCTGCAGCCTCTGCTAATGG CGGACAGGCTTTCCTGGCAGAGGTCCCTGATTCTGAGGAAGGGGAGTCCGGGTGGACTGACACAGAGTCA GATTCAGACTCTGAGCCCGAGACCCAGCGCAGAGGGAGGGGAAGAAGACCCGTTGCCATGCAGAAGCGCC CCTTTCCTTATGAAATTGATGAGATTCTGGGTGTCCGCGATCTCAGGAAGGTCCTTGCCTTGCTTCAGAA ATCTGATGATCCTTTCATCCAACAGGTAGCTTTGCTCACTCTGAGCAACAATGCCAATTATTCATGCAAT CAAGAGACAATCCGCAAATTGGGAGGCCTCCCAATTATTGCAAACATGATCAACAAAACTGATCCACACA TTAAGGAAAAAGCCTTAATGGCCATGAATAACCTGAGTGAGAATTATGAAAATCAGGGCCGGCTTCAGGT GTACATGAATAAAGTGATGGATGATATCATGGCCTCTAACCTGAACTCAGCAGTTCAAGTAGTTGGACTA AAATTTCTAACAAACATGACTATTACTAATGACTACCAACACCTGCTTGTCAATTCCATTGCAAACTTTT TCCGTTTGCTATCTCAGGGAGGTGGAAAAATCAAGGTTGAGATTTTGAAAATCCTTTCGAATTTTGCTGA AAATCCAGATATGTTGAAGAAACTTCTCAGTACCCAAGTGCCAGCATCATTTAGTTCCCTCTATAATTCT TACGTGGAATCAGAAATCCTTATTAATGCCCTTACTCTATTTGAGATTATCTATGACAATCTCAGAGCAG AAGTGTTTAACTATAGAGAATTCAATAAAGGTTCCCTTTTTTACTTATGCACTACATCTGGAGTGTGTGT TAAGAAAATTAGAGCCTTAGCAAATCACCATGACCTCTTAGTGAAAGTGAAAGTTATAAAACTAGTGAAC AAATTCTGA
Translation (632 aa): MSRVRDAGCVAAGIVIGAGAWYCVYKYTRGRDQTKKRMAKPKNRAVAGTGARARAGLRAGFTIDLGSGFS PPTPVRAEAEDRAQDEASALDTVGAEAVAPAASSAEAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIA PPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPG VASPTEAAEAPVPATPTGAAAPTGAAESPGTSGSPRTAVVPGTSAAKKATPGAHTGAIPKATSATGAVPK GGGKGVTRSRNGGKGKGKKSKVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTES DSDSEPETQRRGRGRRPVAMQKRPFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCN QETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQVYMNKVMDDIMASNLNSAVQVVGL KFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDMLKKLLSTQVPASFSSLYNS YVESEILINALTLFEIIYDNLRAEVFNYREFNKGSLFYLCTTSGVCVKKIRALANHHDLLVKVKVIKLVN KF
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