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Report for CCDS76046.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76046.1 Public Homo sapiens X MAGEA2B 24 110 108 CCDS HistoryNCBI Gene:266740Re-query CCDS DB by CCDS ID:76046.1Re-query CCDS DB by GeneID:266740See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76046.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331220.6 ENSP00000333487.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331220.6Link to Ensembl Protein Viewer:ENSP00000333487.2Re-query CCDS DB by Nucleotide ID:ENST00000331220Re-query CCDS DB by Protein ID:ENSP00000333487
Original member Current member EBI ENST00000370293.6 ENSP00000359316.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370293.6Link to Ensembl Protein Viewer:ENSP00000359316.2Re-query CCDS DB by Nucleotide ID:ENST00000370293Re-query CCDS DB by Protein ID:ENSP00000359316
Original member Current member EBI ENST00000682532.1 ENSP00000507594.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682532.1Link to Ensembl Protein Viewer:ENSP00000507594.1Re-query CCDS DB by Nucleotide ID:ENST00000682532Re-query CCDS DB by Protein ID:ENSP00000507594
Original member Current member NCBI NM_001321400.1 NP_001308329.1 Accepted alive Link to Nucleotide Sequence:NM_001321400.1Link to Protein Sequence:NP_001308329.1Re-query CCDS DB by Nucleotide ID:NM_001321400Re-query CCDS DB by Protein ID:NP_001308329Link to BLAST:NP_001308329.1
Original member Current member NCBI NM_001321401.1 NP_001308330.1 Accepted alive Link to Nucleotide Sequence:NM_001321401.1Link to Protein Sequence:NP_001308330.1Re-query CCDS DB by Nucleotide ID:NM_001321401Re-query CCDS DB by Protein ID:NP_001308330Link to BLAST:NP_001308330.1
Original member Current member NCBI NM_001321402.1 NP_001308331.1 Accepted alive Link to Nucleotide Sequence:NM_001321402.1Link to Protein Sequence:NP_001308331.1Re-query CCDS DB by Nucleotide ID:NM_001321402Re-query CCDS DB by Protein ID:NP_001308331Link to BLAST:NP_001308331.1
Original member Current member NCBI NM_001321403.1 NP_001308332.1 Accepted alive Link to Nucleotide Sequence:NM_001321403.1Link to Protein Sequence:NP_001308332.1Re-query CCDS DB by Nucleotide ID:NM_001321403Re-query CCDS DB by Protein ID:NP_001308332Link to BLAST:NP_001308332.1
Original member Current member NCBI NM_001321404.1 NP_001308333.1 Accepted alive Link to Nucleotide Sequence:NM_001321404.1Link to Protein Sequence:NP_001308333.1Re-query CCDS DB by Nucleotide ID:NM_001321404Re-query CCDS DB by Protein ID:NP_001308333Link to BLAST:NP_001308333.1
Original member Current member NCBI NM_001386132.1 NP_001373061.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386132.1Link to Protein Sequence:NP_001373061.1Re-query CCDS DB by Nucleotide ID:NM_001386132Re-query CCDS DB by Protein ID:NP_001373061Link to BLAST:NP_001373061.1
Original member Current member NCBI NM_153488.4 NP_705692.1 Accepted alive Link to Nucleotide Sequence:NM_153488.4Link to Protein Sequence:NP_705692.1Re-query CCDS DB by Nucleotide ID:NM_153488Re-query CCDS DB by Protein ID:NP_705692Link to BLAST:NP_705692.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308329.1 314 P43356 314 100% 0 0
NP_001308330.1 314 P43356 314 100% 0 0
NP_001308331.1 314 P43356 314 100% 0 0
NP_001308332.1 314 P43356 314 100% 0 0
NP_001308333.1 314 P43356 314 100% 0 0
NP_001373061.1 314 P43356 314 100% 0 0
NP_705692.1 314 P43356 314 100% 0 0

Chromosomal Locations for CCDS 76046.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152717107 152718051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGCCTCTTGAGCAGAGGAGTCAGCACTGCAAGCCTGAAGAAGGCCTTGAGGCCCGAGGAGAGGCCCTGG
GCCTGGTGGGTGCGCAGGCTCCTGCTACTGAGGAGCAGCAGACCGCTTCTTCCTCTTCTACTCTAGTGGA
AGTTACCCTGGGGGAGGTGCCTGCTGCCGACTCACCGAGTCCTCCCCACAGTCCTCAGGGAGCCTCCAGC
TTCTCGACTACCATCAACTACACTCTTTGGAGACAATCCGATGAGGGCTCCAGCAACCAAGAAGAGGAGG
GGCCAAGAATGTTTCCCGACCTGGAGTCCGAGTTCCAAGCAGCAATCAGTAGGAAGATGGTTGAGTTGGT
TCATTTTCTGCTCCTCAAGTATCGAGCCAGGGAGCCGGTCACAAAGGCAGAAATGCTGGAGAGTGTCCTC
AGAAATTGCCAGGACTTCTTTCCCGTGATCTTCAGCAAAGCCTCCGAGTACTTGCAGCTGGTCTTTGGCA
TCGAGGTGGTGGAAGTGGTCCCCATCAGCCACTTGTACATCCTTGTCACCTGCCTGGGCCTCTCCTACGA
TGGCCTGCTGGGCGACAATCAGGTCATGCCCAAGACAGGCCTCCTGATAATCGTCCTGGCCATAATCGCA
ATAGAGGGCGACTGTGCCCCTGAGGAGAAAATCTGGGAGGAGCTGAGTATGTTGGAGGTGTTTGAGGGGA
GGGAGGACAGTGTCTTCGCACATCCCAGGAAGCTGCTCATGCAAGATCTGGTGCAGGAAAACTACCTGGA
GTACCGGCAGGTGCCCGGCAGTGATCCTGCATGCTACGAGTTCCTGTGGGGTCCAAGGGCCCTCATTGAA
ACCAGCTATGTGAAAGTCCTGCACCATACACTAAAGATCGGTGGAGAACCTCACATTTCCTACCCACCCC
TGCATGAACGGGCTTTGAGAGAGGGAGAAGAGTGA

Translation (314 aa):
MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASS
FSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVL
RNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIA
IEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIE
TSYVKVLHHTLKIGGEPHISYPPLHERALREGEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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