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Report for CCDS7191.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7191.1 Public Homo sapiens 10 GJD4 24 110 108 CCDS HistoryNCBI Gene:219770Re-query CCDS DB by CCDS ID:7191.1Re-query CCDS DB by GeneID:219770See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7191.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321660.2 ENSP00000315070.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000321660.2Link to Ensembl Protein Viewer:ENSP00000315070.1Re-query CCDS DB by Nucleotide ID:ENST00000321660Re-query CCDS DB by Protein ID:ENSP00000315070
Original member Current member NCBI NM_153368.3 NP_699199.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153368.3Link to Protein Sequence:NP_699199.2Re-query CCDS DB by Nucleotide ID:NM_153368Re-query CCDS DB by Protein ID:NP_699199Link to BLAST:NP_699199.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699199.2 370 Q96KN9 370 100% 0 0

Chromosomal Locations for CCDS 7191.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 35605568 35605631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 35607578 35608626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGGAAGGCGTGGACTTGCTAGGGTTTCTCATCATCACATTAAACTGCAACGTGACCATGGTGGGAAAGC
TCTGGTTCGTCCTCACGATGCTGCTGCGGATGCTGGTGATTGTCTTGGCGGGGCGACCCGTCTACCAGGA
CGAGCAGGAGAGGTTTGTCTGCAACACGCTGCAGCCGGGATGCGCCAATGTTTGCTACGACGTCTTCTCC
CCCGTGTCTCACCTGCGGTTCTGGCTGATCCAGGGCGTGTGCGTCCTCCTCCCCTCCGCCGTCTTCAGCG
TCTATGTCCTGCACCGAGGAGCCACGCTCGCCGCGCTGGGCCCCCGCCGCTGCCCCGACCCCCGGGAGCC
GGCCTCCGGGCAGAGACGCTGCCCGCGGCCATTCGGGGAGCGCGGCGGCCTCCAGGTGCCCGACTTTTCG
GCCGGCTACATCATCCACCTCCTCCTCCGGACCCTGCTGGAGGCAGCCTTCGGGGCCTTGCACTACTTTC
TCTTTGGATTCCTGGCCCCGAAGAAGTTCCCTTGCACGCGCCCTCCGTGCACGGGCGTGGTGGACTGCTA
CGTGTCGCGGCCCACAGAGAAGTCCCTGCTGATGCTGTTCCTCTGGGCGGTCAGCGCGCTGTCTTTTCTG
CTGGGCCTCGCCGACCTGGTCTGCAGCCTGCGGCGGCGGATGCGCAGGAGGCCGGGACCCCCCACAAGCC
CCTCCATCCGGAAGCAGAGCGGAGCCTCAGGCCACGCGGAGGGACGCCGGACTGACGAGGAGGGTGGGCG
GGAGGAAGAGGGGGCACCGGCGCCCCCGGGTGCACGCGCCGGAGGGGAGGGGGCTGGCAGCCCCAGGCGT
ACATCCAGGGTGTCAGGGCACACGAAGATTCCGGATGAGGATGAGAGTGAGGTGACATCCTCCGCCAGCG
AAAAGCTGGGCAGACAGCCCCGGGGCAGGCCCCACCGAGAGGCCGCCCAGGACCCCAGGGGCTCAGGATC
CGAGGAGCAGCCCTCAGCAGCCCCCAGCCGCCTGGCCGCGCCCCCTTCCTGCAGCAGCCTGCAGCCCCCT
GACCCGCCTGCCAGCTCCAGTGGTGCTCCCCACCTGAGAGCCAGGAAGTCTGAGTGGGTGTGA

Translation (370 aa):
MEGVDLLGFLIITLNCNVTMVGKLWFVLTMLLRMLVIVLAGRPVYQDEQERFVCNTLQPGCANVCYDVFS
PVSHLRFWLIQGVCVLLPSAVFSVYVLHRGATLAALGPRRCPDPREPASGQRRCPRPFGERGGLQVPDFS
AGYIIHLLLRTLLEAAFGALHYFLFGFLAPKKFPCTRPPCTGVVDCYVSRPTEKSLLMLFLWAVSALSFL
LGLADLVCSLRRRMRRRPGPPTSPSIRKQSGASGHAEGRRTDEEGGREEEGAPAPPGARAGGEGAGSPRR
TSRVSGHTKIPDEDESEVTSSASEKLGRQPRGRPHREAAQDPRGSGSEEQPSAAPSRLAAPPSCSSLQPP
DPPASSSGAPHLRARKSEWV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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