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Report for CCDS9969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9969.1 Public Homo sapiens 14 WDR20 24 110 108 CCDS HistoryNCBI Gene:91833Re-query CCDS DB by CCDS ID:9969.1Re-query CCDS DB by GeneID:91833See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9969.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342702.8 ENSP00000341037.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000342702.8Link to Ensembl Protein Viewer:ENSP00000341037.3Re-query CCDS DB by Nucleotide ID:ENST00000342702Re-query CCDS DB by Protein ID:ENSP00000341037
Original member Current member NCBI NM_144574.4 NP_653175.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144574.4Link to Protein Sequence:NP_653175.2Re-query CCDS DB by Nucleotide ID:NM_144574Re-query CCDS DB by Protein ID:NP_653175Link to BLAST:NP_653175.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653175.2 569 Q8TBZ3-1 569 100% 0 0

Chromosomal Locations for CCDS 9969.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 102139924 102140172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102194938 102195120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102208603 102209880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1710 nt):
ATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGT
ACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCC
TGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGC
CGGGAGCTGTACTTCTATATCTACAAGGGGGTCCGCAAGGCTGCTGACTTGAGTAAACCAATAGATAAAA
GGATATACAAAGGAACACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTC
TCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTT
TTTAATGAGGAAAGACTAATAGACAAGTCACGAGTTACCTGTGTCAAATGGGTTCCCGGTTCGGAAAGCC
TTTTCCTAGTAGCCCACTCGAGTGGGAACATGTACTTATATAATGTGGAGCACACTTGTGGCACCACAGC
CCCCCACTACCAGCTTCTGAAGCAGGGAGAGAGCTTTGCCGTGCACACTTGCAAGAGCAAATCCACGAGG
AACCCTCTCCTTAAGTGGACGGTGGGCGAGGGGGCCCTCAACGAGTTTGCTTTCTCCCCAGATGGCAAGT
TCTTAGCGTGCGTGAGCCAGGACGGGTTTCTGCGGGTGTTCAACTTTGACTCAGTGGAGCTGCACGGTAC
GATGAAAAGCTACTTTGGGGGCTTGCTGTGTGTGTGCTGGAGCCCGGATGGCAAGTACATCGTGACAGGT
GGGGAGGACGACTTGGTGACAGTCTGGTCCTTTGTAGACTGCCGAGTAATAGCCAGAGGCCACGGGCACA
AGTCCTGGGTCAGTGTTGTAGCGTTTGACCCTTATACCACTAGTGTAGAAGAAGGTGACCCTATGGAGTT
TAGTGGCAGCGATGAGGACTTCCAAGACCTTCTTCATTTTGGCAGAGATCGAGCAAATAGTACACAGTCC
AGGCTCTCCAAACGGAACTCTACAGACAGCCGCCCCGTAAGTGTCACGTATCGGTTTGGTTCCGTGGGCC
AGGACACACAGCTCTGTTTATGGGACCTTACAGAAGATATCCTTTTCCCTCACCAACCCCTCTCAAGAGC
AAGGACACACACAAATGTCATGAATGCCACGAGTCCTCCTGCTGGAAGCAATGGGAACAGTGTTACAACA
CCCGGGAACTCTGTGCCGCCTCCTCTGCCACGGTCCAACAGCCTTCCACATTCAGCAGTCTCAAATGCTG
GCAGCAAAAGCAGTGTCATGGACGGGGCCATTGCTTCTGGGGTCAGCAAATTTGCAACACTTTCACTACA
TGACCGGAAGGAGAGGCACCACGAGAAAGATCACAAGCGAAATCATAGCATGGGACACATTTCTAGCAAG
AGCAGTGACAAACTGAATCTAGTTACCAAAACCAAAACGGACCCTGCTAAAACTCTGGGAACGCCCCTGT
GTCCTCGAATGGAAGATGTTCCCTTGTTAGAGCCGCTGATATGTAAAAAGATAGCACATGAGAGACTGAC
TGTACTAATATTTCTTGAAGACTGTATAGTCACTGCTTGTCAGGAGGGATTTATTTGCACATGGGGAAGG
CCTGGTAAAGTGGTAAGTTTTAATCCTTAA

Translation (569 aa):
MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVG
RELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKL
FNEERLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTR
NPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTG
GEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDFQDLLHFGRDRANSTQS
RLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTT
PGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSK
SSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGR
PGKVVSFNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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