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Report for CCDS51912.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51912.1 Public Mus musculus 6 Nop2 23 108 98 CCDS HistoryNCBI Gene:110109Re-query CCDS DB by CCDS ID:51912.1Re-query CCDS DB by GeneID:110109See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51912.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044200.10 ENSMUSP00000047123.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044200.10Link to Ensembl Protein Viewer:ENSMUSP00000047123.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000044200Re-query CCDS DB by Protein ID:ENSMUSP00000047123
Original member Current member NCBI NM_138747.2 NP_620086.2 Accepted alive Link to Nucleotide Sequence:NM_138747.2Link to Protein Sequence:NP_620086.2Re-query CCDS DB by Nucleotide ID:NM_138747Re-query CCDS DB by Protein ID:NP_620086Link to BLAST:NP_620086.2

Chromosomal Locations for CCDS 51912.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 125132213 125132318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125133519 125133564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125133714 125133802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125134547 125134731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125136913 125136968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125137055 125137215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125137311 125137510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125137635 125137724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125139640 125139727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125139806 125139946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125140535 125140674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125140790 125140879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125141036 125141158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125141274 125141502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 125144001 125144641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2385 nt):
ATGGGGCGCAAGTTGGATCCTACGAAGAAGGAGAAGCGTGGACCCGGCCGAAAGGCCCGAAAACAGAAGG
GTGCGGAGACCGAATTGGTCAGATTTTTGCCTGCAGCTGGCGATGAGAATTCCAAGAGGCTGTCGAGTCG
TGCCCGAAAGCGGGCAGCCAAGAGGAGGGCAGGGTCTGTTGACGTCCCTAAGCCAAATAAGTCTCCTGGG
ATCAAAACATTGCCTGGAGAGTTATCCAAAGGAGCAGTCCAGGCTCGAGGTAAGAAGCGCCCAGCACCAA
TTCAAAACAGTGATGGGGACGAGGAGGAAGACTCGGGGGAAGACGATGTGGTGACCCAGGGGGACCTTTG
GGGCTCTGAGGACAGTGATGAAGATATGGTGGATGACTATGGAGCTGCCTCTAACTCGGAGGATGAGGAG
GAAAAGCTGTTGCCTATTGAAAGAGCTGCCCTGAAGCAGAAAGCCCAGGATGCCACAGCTGGGGTCCTGT
GGAATGAAGAGGACACTGATGAAGATGAAGATGATGATGGTGTGTCCCCTGAGTCCCACCCCAGAAAGGA
TGACAAAGCAGAGGGGGATTTGCAGATTAATGTGGAAGATGAGGAAGCCTTTGTGCTGCCCCCTGCTGGG
GAGACGGACCAGGATGGCCAGGCTCCAGACCTGCAGCGAGTTCACAAGCGGATCCAGGACATCGTGGGAG
TGCTGCGGGATTTCGGAGCTCAGCGAGAAGAGGGCCGGTCTCGAGCTGAGTATCTAAGTCGGCTTCAGAA
GGACCTGGCCACTTACTATTCTTATGGAGACTTCCTGCTGAGCAAGCTCATGGAGCTGTTCCCTCTGTCT
GAGTTGATCGAGTTCTTAGAAGCTAATGAGGTGCCCCGGCCAATCACCCTTCGGACCAACACCTTGAAAA
CCCGTCGCCGAGACCTTGCTCAGGCTCTGATCAATCGTGGGGTTAATCTGGATCCACTGGGGAAGTGGTC
AAAGTCTGGACTTGTGGTATATGATTCTTCAGTGCCTATTGGCGCTACCCCTGAGTACCTCGCTGGACAC
TATATGCTGCAGGGAGCTTCCAGTATGTTGCCCGTCATGGCCCTGGCACCTCAGGAGCATGAGCGGATCT
TAGACATGTGCTGTGCTCCTGGGGGGAAGACCAGCTACATAGCTCAGCTGATGAAGAACACAGGAGTGAT
CCTTGCCAACGATGCCAATGCAGACCGGCTCAAGAGCGTGGTGGGCAACCTGCACCGCTTGGGAGTCACC
AACACCATCATCAGCCACTATGATGGGCGCCAGTTCCCCAAGGTGGTAGGGGGCTTTGATCGAGTGCTAC
TGGATGCTCCTTGTAGTGGCACAGGAGTCATCTCCAAAGACCCTGCTGTGAAGACGAACAAGGATGAGAA
AGACATCCAGCGCTGTGCCCACCTTCAGAAGGAACTGCTGCTCAGTGCTATCGACTCAGTGAACGCTGCC
TCCAAGACCGGAGGCTACCTGGTCTACTGCACCTGTTCCATTACGGTGGAAGAGAACGAGTGGGTGGTAG
ACTATGCCTTGAAGAAGAGGAATGTGCGGCTGGTGCCCACCGGCCTGGACTTCGGCCAGGAAGGTTTTAC
CCGCTTCCAAGCAAGGCGCTTTCACCCCACTCTGCGTTCCACCCGGCGCTTCTACCCTCACACTCACAAT
ATGGACGGTTTCTTTATCGCCAAGTTCAAGAAATTTTCCAATTCTATTCCCCAGCCCCATGCAGGAAACT
CGGCAGCAGCTACCCCTACAGAGCCTGACCTGAAGGATCAGGTCACCCCAAAGTCTGAGAACGGTAGTCA
GCCCACCAAGAAAGCCCGTGGGGCTGTGAAGGCAAAGCAGCAGTTGCTGAGACAGCCACATTCCAAGAAG
CCCTTCCAGAAGTTGAACGGCATCGCCAAAGGGCCAGGCTTGTCCACTGAACCTTCTGTCCCAGATGCCC
AAGTGTCTACCAGGCCCAGTCAGTCTGCTGGGAATGCTGACGTGAACAGCAAACGAAAGAGGTCTGAGAA
GCTGAAGCAGCGGGGACCTAAGTGGAAGCCCTCTAAGGAGGCTGCTGTCCCAAAGCCGAGCGCCCCTTCC
AGGGTTGAGGACTCGAGAACACCTCCTGTGCCGACTCCCTCTGAAATCCGTGCTGCCCCAAGGCCTAAGG
ACTGTGCTCCATCCCTTGGGGAAGCCAAAAAGAAACAGAAAGGAAAGCAGCAGTTAGCACAGCAGCCTGC
TAATGGAGCTGCTCCCCTGAAAGAAGATGCTGTTTCCAAGGGACCCTCAGCCCCCTTTGTGTCTCCCCAC
AGTTCCACCAGGCCCCCACCAGCAAAAAGGAGGAAATCAATGACAAAGGGCAACAGCCAGCCTCTGTTGT
CTTAA

Translation (794 aa):
MGRKLDPTKKEKRGPGRKARKQKGAETELVRFLPAAGDENSKRLSSRARKRAAKRRAGSVDVPKPNKSPG
IKTLPGELSKGAVQARGKKRPAPIQNSDGDEEEDSGEDDVVTQGDLWGSEDSDEDMVDDYGAASNSEDEE
EKLLPIERAALKQKAQDATAGVLWNEEDTDEDEDDDGVSPESHPRKDDKAEGDLQINVEDEEAFVLPPAG
ETDQDGQAPDLQRVHKRIQDIVGVLRDFGAQREEGRSRAEYLSRLQKDLATYYSYGDFLLSKLMELFPLS
ELIEFLEANEVPRPITLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKSGLVVYDSSVPIGATPEYLAGH
YMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANADRLKSVVGNLHRLGVT
NTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDIQRCAHLQKELLLSAIDSVNAA
SKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFQARRFHPTLRSTRRFYPHTHN
MDGFFIAKFKKFSNSIPQPHAGNSAAATPTEPDLKDQVTPKSENGSQPTKKARGAVKAKQQLLRQPHSKK
PFQKLNGIAKGPGLSTEPSVPDAQVSTRPSQSAGNADVNSKRKRSEKLKQRGPKWKPSKEAAVPKPSAPS
RVEDSRTPPVPTPSEIRAAPRPKDCAPSLGEAKKKQKGKQQLAQQPANGAAPLKEDAVSKGPSAPFVSPH
SSTRPPPAKRRKSMTKGNSQPLLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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