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Report for CCDS15359.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15359.1 Public Mus musculus 1 Ivns1abp 23 108 98 CCDS HistoryNCBI Gene:117198Re-query CCDS DB by CCDS ID:15359.1Re-query CCDS DB by GeneID:117198See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15359.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023918.12 ENSMUSP00000023918.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023918.12Link to Ensembl Protein Viewer:ENSMUSP00000023918.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000023918Re-query CCDS DB by Protein ID:ENSMUSP00000023918
Original member Current member NCBI NM_054102.2 NP_473443.2 Accepted alive Link to Nucleotide Sequence:NM_054102.2Link to Protein Sequence:NP_473443.2Re-query CCDS DB by Nucleotide ID:NM_054102Re-query CCDS DB by Protein ID:NP_473443Link to BLAST:NP_473443.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_473443.2 642 Q920Q8-1 642 100% 0 0

Chromosomal Locations for CCDS 15359.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151350999 151351109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151351554 151351723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151351830 151351905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151353920 151354093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151354634 151354759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151356129 151356236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151359622 151359751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151359953 151360177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151360718 151360839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151360932 151361058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151361143 151361274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151361462 151361635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151363112 151363365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1929 nt):
ATGATTCCCAATGGATATTTGATGTTTGAAGATGAAAATTTTATTGAATCATCTGTTGCCAAATTAAATG
CCTTGAGGAAGAGTGGGCAGTTCTGTGATGTTCGACTTCAGGTCTGTGGCCATGAGATGCTAGCACACAG
GGCAGTCCTGGCTTGCTGTAGCCCCTATCTATTTGAAATCTTCAATAGTGACAGTGACCCTCATGGAGTT
TCTCATGTGAAGTTGGATGATCTCAATCCAGAAGCTGTTGAAGTCTTGCTGAATTATGCATACACGGCTC
AGTTGAAAGCTGATAAGGAATTAGTAAAAGATGTTTATTCTGCAGCCAAGAAGCTGAAGATGGACCGAGT
CAAGCAGGTCTGCGGAGATTATTTACTATCTAGAATGGATGTTACTAGCTGCATCTCTTACCGAAATTTT
GCAAGTTGTATGGGAGACTCCCGTTTGTTGAATAAAGTTGACGCTTATATTCAGGAGCATTTGTTACAAA
TTTCAGAAGAGGAGGAATTTCTTAAGCTTCCGAGACTAAAGTTGGAGGTAATGCTTGAAGATAATGTGTG
CTTGCCCAGCAATGGCAAGTTGTATACAAAGGTAATCAACTGGGTGCAGCGTAGCATCTGGGAGAATGGA
GACAGCCTGGAGGAGCTCATGGAAGAGGTTCAAACCTTGTACTACTCAGCTGATCACAAGCTGCTTGATG
GGAACCCACTAGATGGACAGGCTGAGGTGTTTGGCAGTGATGATGACCACATTCAGTTTGTGCAGAAAAA
GCCACCCCGTGAGAATGGCCATAAGCAGATAAGTGGCAGTTCCACTGGATGTCTCTCTTCTCCAAATGCT
TCAATGCAAAGCCCTAAGCATGAGTGGAAAATCGTTGCTTCAGAAAAGACTTCAAATAACACTTACTTGT
GCCTGGCTGTGCTGGACAGTACATTCTGTGTCATTTTCCTTCATGGGCGGAACAGTCCACAGAGCTCACC
AACAAGTACTCCAAAACTGAGCAAGAGTTTAAGCTTCGAGATGCAACCAGATGAGCTTCTAGAAAAGCCC
ATGTCTCCCATGCAGTACGCACGGTCTGGACTAGGGACAGCAGAGATGAATGGCAAACTCATAGCTGCAG
GTGGTTATAACAGAGAGGAATGTCTTCGAACAGTTGAATGCTATGATCCACATACAGATCACTGGTCCTT
CCTTGCTCCCATGAGAACACCAAGAGCCCGCTTTCAAATGGCTGTGCTGATGGGACAGCTCTATGTGGTG
GGTGGATCAAATGGACACTCAGATGACCTGAGTTGTGGAGAAATGTATGATCCAAACATTGATGACTGGA
CCCCTGTTCCAGAGCTGAGAACCAACCGTTGTAATGCAGGAGTGTGTGCTCTGAATGGGAAATTGTACAT
TGTTGGTGGCTCTGATCCATATGGTCAAAAGGGCCTGAAAAATTGTGATGTATTTGATCCTGTAACGAAG
TCATGGACAAGCTGTGCTCCTCTTAACATTCGTCGACACCAGTCTGCAGTTTGTGAACTTGGTGGTTATT
TGTATATAATTGGAGGTGCAGAATCTTGGAATTGTCTGAACACAGTAGAACGATACAATCCTGAAAACAA
CACCTGGACTTTAATTGCACCCATGAATGTGGCGAGGCGAGGGGCTGGAGTCGCTGTGCTTGATGGAAAA
CTGTTTGTAGGTGGTGGCTTTGATGGTTCTCACGCCATCAGTTGTGTGGAGATGTATGATCCAACTAGAA
ATGAATGGAAGATGATGGGAAATATGACTTCACCAAGGAGCAATGCTGGGATCACAACTGTAGGGAATAC
CATTTATGCAGTGGGAGGATTCGATGGCAATGAGTTTCTGAATACTGTGGAAGTCTACAACCCTCAGTCA
AATGAGTGGAGCCCTTACACAAAGATTTTCCAGTTTTAA

Translation (642 aa):
MIPNGYLMFEDENFIESSVAKLNALRKSGQFCDVRLQVCGHEMLAHRAVLACCSPYLFEIFNSDSDPHGV
SHVKLDDLNPEAVEVLLNYAYTAQLKADKELVKDVYSAAKKLKMDRVKQVCGDYLLSRMDVTSCISYRNF
ASCMGDSRLLNKVDAYIQEHLLQISEEEEFLKLPRLKLEVMLEDNVCLPSNGKLYTKVINWVQRSIWENG
DSLEELMEEVQTLYYSADHKLLDGNPLDGQAEVFGSDDDHIQFVQKKPPRENGHKQISGSSTGCLSSPNA
SMQSPKHEWKIVASEKTSNNTYLCLAVLDSTFCVIFLHGRNSPQSSPTSTPKLSKSLSFEMQPDELLEKP
MSPMQYARSGLGTAEMNGKLIAAGGYNREECLRTVECYDPHTDHWSFLAPMRTPRARFQMAVLMGQLYVV
GGSNGHSDDLSCGEMYDPNIDDWTPVPELRTNRCNAGVCALNGKLYIVGGSDPYGQKGLKNCDVFDPVTK
SWTSCAPLNIRRHQSAVCELGGYLYIIGGAESWNCLNTVERYNPENNTWTLIAPMNVARRGAGVAVLDGK
LFVGGGFDGSHAISCVEMYDPTRNEWKMMGNMTSPRSNAGITTVGNTIYAVGGFDGNEFLNTVEVYNPQS
NEWSPYTKIFQF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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