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Report for CCDS6734.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6734.1 Public Homo sapiens 9 TRIM14 24 110 108 CCDS HistoryNCBI Gene:9830Re-query CCDS DB by CCDS ID:6734.1Re-query CCDS DB by GeneID:9830See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6734.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342043.3 ENSP00000343990.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000342043.3Link to Ensembl Protein Viewer:ENSP00000343990.3Re-query CCDS DB by Nucleotide ID:ENST00000342043Re-query CCDS DB by Protein ID:ENSP00000343990
Original member Current member EBI ENST00000341469.7 ENSP00000344208.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341469.7Link to Ensembl Protein Viewer:ENSP00000344208.2Re-query CCDS DB by Nucleotide ID:ENST00000341469Re-query CCDS DB by Protein ID:ENSP00000344208
Original member Current member EBI ENST00000375098.7 ENSP00000364239.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375098.7Link to Ensembl Protein Viewer:ENSP00000364239.3Re-query CCDS DB by Nucleotide ID:ENST00000375098Re-query CCDS DB by Protein ID:ENSP00000364239
Original member Current member NCBI NM_014788.4 NP_055603.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014788.4Link to Protein Sequence:NP_055603.2Re-query CCDS DB by Nucleotide ID:NM_014788Re-query CCDS DB by Protein ID:NP_055603Link to BLAST:NP_055603.2
Original member Current member NCBI NM_033219.3 NP_150088.1 Accepted alive Link to Nucleotide Sequence:NM_033219.3Link to Protein Sequence:NP_150088.1Re-query CCDS DB by Nucleotide ID:NM_033219Re-query CCDS DB by Protein ID:NP_150088Link to BLAST:NP_150088.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055603.2 442 Q14142-1 442 100% 0 0
NP_150088.1 442 Q14142-1 442 100% 0 0

Chromosomal Locations for CCDS 6734.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 98087470 98088005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98091909 98092001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98094867 98095029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98099931 98100164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98109889 98109984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98118982 98119188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1329 nt):
ATGGCGGGCGCGGCGACCGGGAGCCGGACCCCTGGGAGGTCGGAGCTTGTCGAGGGATGCGGCTGGCGCT
GCCCGGAGCATGGCGACCGCGTGGCTGAGCTCTTCTGTCGCCGCTGCCGCCGCTGCGTGTGCGCGCTTTG
CCCGGTGCTGGGCGCGCACCGTGGCCACCCTGTGGGCCTGGCGCTGGAGGCAGCGGTGCACGTGCAGAAA
CTCAGCCAAGAATGTTTAAAGCAGCTGGCAATCAAGAAGCAGCAGCACATTGACAACATAACCCAGATAG
AAGATGCCACCGAGAAGCTCAAGGCTAATGCAGAGTCAAGTAAAACCTGGCTGAAGGGGAAATTCACTGA
ACTCAGATTACTACTTGACGAAGAGGAAGCGCTGGCCAAGAAATTCATTGATAAAAACACGCAGCTTACC
CTCCAGGTGTACAGGGAACAAGCTGACTCTTGCAGAGAGCAACTTGACATCATGAATGATCTCTCCAACA
GGGTCTGGAGTATCAGCCAGGAGCCCGATCCTGTCCAGAGGCTTCAGGCATACACGGCCACCGAGCAGGA
GATGCAGCAGCAGATGAGCCTCGGGGAGCTGTGCCATCCCGTGCCCCTCTCCTTTGAGCCCGTCAAGAGC
TTCTTTAAGGGCCTCGTGGAAGCCGTGGAGAGTACATTACAGACGCCATTGGACATTCGCCTTAAGGAAA
GCATAAACTGCCAGCTCTCAGACCCTTCCAGCACCAAGCCAGGTACCTTGTTGAAAACCAGCCCCTCACC
AGAGCGATCGCTATTGCTGAAATACGCGCGCACGCCCACGCTGGATCCTGACACGATGCACGCGCGCCTG
CGCCTGTCCGCCGATCGCCTGACGGTGCGCTGCGGCCTGCTGGGCAGCCTGGGGCCCGTGCCCGTGCTGC
GGTTCGACGCGCTCTGGCAAGTGCTGGCTCGTGACTGCTTCGCCACCGGCCGCCACTACTGGGAGGTTGA
CGTGCAGGAGGCGGGCGCCGGCTGGTGGGTGGGCGCGGCCTACGCCTCCCTTCGGCGCCGCGGGGCCTCG
GCCGCCGCCCGCCTGGGCTGCAACCGCCAGTCCTGGTGCCTCAAGCGCTACGACCTTGAGTACTGGGCCT
TCCACGACGGCCAGCGCAGCCGCCTGCGGCCCCGCGACGACCTCGACCGGCTCGGCGTCTTCCTGGACTA
CGAGGCCGGCGTCCTCGCCTTCTACGACGTGACGGGCGGCATGAGCCACCTGCATACCTTCCGCGCCACG
TTCCAGGAGCCGCTCTACCCGGCCCTGCGGCTCTGGGAGGGGGCCATCAGCATCCCCCGGCTGCCCTAG

Translation (442 aa):
MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGLALEAAVHVQK
LSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRLLLDEEEALAKKFIDKNTQLT
LQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQAYTATEQEMQQQMSLGELCHPVPLSFEPVKS
FFKGLVEAVESTLQTPLDIRLKESINCQLSDPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARL
RLSADRLTVRCGLLGSLGPVPVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGAS
AAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
FQEPLYPALRLWEGAISIPRLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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