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Report for CCDS37109.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37109.1 Public Mus musculus 15 Pycr3 23 108 98 CCDS HistoryNCBI Gene:66194Re-query CCDS DB by CCDS ID:37109.1Re-query CCDS DB by GeneID:66194See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37109.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053918.8 ENSMUSP00000049605.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053918.8Link to Ensembl Protein Viewer:ENSMUSP00000049605.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000053918Re-query CCDS DB by Protein ID:ENSMUSP00000049605
Original member NCBI NM_025412.2 NP_079688.2 Updated not alive Link to Nucleotide Sequence:NM_025412.2Link to Protein Sequence:NP_079688.2Re-query CCDS DB by Nucleotide ID:NM_025412Re-query CCDS DB by Protein ID:NP_079688
Current member NCBI NM_025412.3 NP_079688.2 Accepted alive Link to Nucleotide Sequence:NM_025412.3Link to Protein Sequence:NP_079688.2Re-query CCDS DB by Nucleotide ID:NM_025412Re-query CCDS DB by Protein ID:NP_079688Link to BLAST:NP_079688.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079688.2 274 Q9DCC4 274 100% 0 0

Chromosomal Locations for CCDS 37109.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75916897 75917079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75917237 75917329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75918252 75918464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75918673 75918852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75919229 75919293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75921376 75921466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (825 nt):
ATGGCGGCGACAATGTCTGAACCTCGGCGTGTGGGCTTCGTGGGTGCAGGCCGCATGGCGGAGGCCATTG
CCCGAGGCCTCATCCAAGCAGGCAAAGTAGAAGCTAAACAAGTGCTGGCCAGTGCACCAACGGACAACAA
CCTCTGCCACTTCAGGGCTCTGGGTTGCCAGACTACTCACTCCAACCATGAGGTGCTGCAAAACTGCCCA
CTTGTCATCTTTGCCACCAAACCCCAAGTCCTGCCAACTGTCCTGGCGGAAGTGGCCCCCATAGTCACCA
CTGAGCACATCATCGTATCTGTGGCTGCTGGGATCTCTCTGAGCACAATGGAGGGGCTGTTACCCCCGAA
CACACGAGTATTGCGAGTCTCTCCCAATCTACCCTGCGTTGTCCAGGAGGGGGCCATGGTGATGGCCCGG
GGCCACCATGCTGGGAACGATGACGCAGAGCTCCTACAGAACTTGCTGGAAGCCTGTGGGCAGTGCATAG
AGGTTCCCGAGTCCTACGTAGATATCCACACCGGTCTCAGTGGCAGTGGTGTGGCCTTTGTGTGTACATT
TTCAGAGGCCCTGGCTGAAGGTGCCATCAAAATGGGCATGCCCAGTGGCCTGGCCCACCGCATTGCTGCT
CAGACCCTGCTGGGGACAGCCAAGATGCTGCAGCAGGAAGGGAAGCACCCAGCCCAGCTTCGGACAGATG
TGCTCACACCAGCTGGAACCACCATCCATGGGTTGCATGCCCTAGAGCGGGGCGGTTTTCGAGCGGCTAC
CATGAGTGCGGTGGAAGCAGCTACCTGCCGGGCTAAGGAGCTCAGCAAGAAGTAA

Translation (274 aa):
MAATMSEPRRVGFVGAGRMAEAIARGLIQAGKVEAKQVLASAPTDNNLCHFRALGCQTTHSNHEVLQNCP
LVIFATKPQVLPTVLAEVAPIVTTEHIIVSVAAGISLSTMEGLLPPNTRVLRVSPNLPCVVQEGAMVMAR
GHHAGNDDAELLQNLLEACGQCIEVPESYVDIHTGLSGSGVAFVCTFSEALAEGAIKMGMPSGLAHRIAA
QTLLGTAKMLQQEGKHPAQLRTDVLTPAGTTIHGLHALERGGFRAATMSAVEAATCRAKELSKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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