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Report for CCDS27099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27099.1 Public Mus musculus 14 1700123O20Rik 23 108 98 CCDS HistoryNCBI Gene:58248Re-query CCDS DB by CCDS ID:27099.1Re-query CCDS DB by GeneID:58248See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27099.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038539.7 ENSMUSP00000047702.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038539.7Link to Ensembl Protein Viewer:ENSMUSP00000047702.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000038539Re-query CCDS DB by Protein ID:ENSMUSP00000047702
Original member Current member EBI ENSMUST00000227269.1 ENSMUSP00000153947.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000227269.1Link to Ensembl Protein Viewer:ENSMUSP00000153947.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000227269Re-query CCDS DB by Protein ID:ENSMUSP00000153947
Original member Current member NCBI NM_021437.2 NP_067412.1 Accepted alive Link to Nucleotide Sequence:NM_021437.2Link to Protein Sequence:NP_067412.1Re-query CCDS DB by Nucleotide ID:NM_021437Re-query CCDS DB by Protein ID:NP_067412Link to BLAST:NP_067412.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067412.1 142 Q9JJ93 142 100% 0 0

Chromosomal Locations for CCDS 27099.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 54689805 54690233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (429 nt):
ATGTCACTGGAATCGTCTTCCACATCGGTGCCACCCTGCTTCCCTTCTGTGTTACCTTCAGTGCCTGATG
ACATTGCCAGCTCTTCCCCTCCTCCAATGTCTTACATCACTTCCCAGGAGATGAAGTGTATTCTTTACTG
GTTTGCCAGTTGGTCAGGTCCCCAGCGGGAACGTTTTCTACAGGACCTGGTCGCTAAGGCAGTGCCGGGA
AAGCTACAGCCACTGCTGGATGCTCTGGAGCAGCTCAGTATGTCTGCAGCAAATCGACCACCATGTATCT
TTGAGTGTCAGCTACGTCTTTGGGATCAGTGGTTTCGAGGTTGGGCTGAGCAGGAGCGCAATGAATTTGT
CAGGCAGCTGGAGGTCAGTGAGCCAGATTTCGTGGCGAAGTTTTACCAAGCAGTGGCTGCTACTGCTGGT
AAGGACTGA

Translation (142 aa):
MSLESSSTSVPPCFPSVLPSVPDDIASSSPPPMSYITSQEMKCILYWFASWSGPQRERFLQDLVAKAVPG
KLQPLLDALEQLSMSAANRPPCIFECQLRLWDQWFRGWAEQERNEFVRQLEVSEPDFVAKFYQAVAATAG
KD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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