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Report for CCDS59400.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59400.1 Public Homo sapiens 19 PNMA8B 24 110 108 CCDS HistoryNCBI Gene:57469Re-query CCDS DB by CCDS ID:59400.1Re-query CCDS DB by GeneID:57469See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59400.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000599531.2 ENSP00000473036.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000599531.2Link to Ensembl Protein Viewer:ENSP00000473036.1Re-query CCDS DB by Nucleotide ID:ENST00000599531Re-query CCDS DB by Protein ID:ENSP00000473036
Original member Current member NCBI NM_020709.3 NP_065760.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020709.3Link to Protein Sequence:NP_065760.1Re-query CCDS DB by Nucleotide ID:NM_020709Re-query CCDS DB by Protein ID:NP_065760Link to BLAST:NP_065760.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065760.1 635 Q9ULN7-5 635 100% 0 0

Chromosomal Locations for CCDS 59400.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46493558 46495465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1908 nt):
ATGGCCATGAGCCTTTTGCAGGACTGGTGCCGGAGCCTGGACGTGGACGCGCACAGGGCCCTGCTGGTCA
CCGGCATCCCGGAGGGCCTGGAGCAGGCAGACGTCGAAGCCGTCCTGCAGCCGACCCTCCTGCCCCTGGG
CACGTTCAGGTTGCGACACATGAAGGCTTTGATGAACGAGAAGGCCCAGGCCGCCCTGGTGGAGTTTGTG
GAGGACGTCAATCACGCTGCCATTCCCAGGGAGATCCCAGGCAAGGATGGGGTCTGGAGGGTTCTGTGGA
AGGACCGTGCGCAGGACACGAGGGTCCTGAGGCAGATGAGACGCCTGCTGCTGGATGACGGGCCCACGCA
GGCCGCGGAGGCTGGGACCCCCGGGGAGGCACCCACCCCTCCCGCTTCGGAGACGCAGGCCCAGGATTCT
GGGGAGGTAACAGGGCAGGCTGGCTCGCTTCTTGGGGCAGCCAGGAACCCAAGGAGGGGCCGTCGGGGTC
GCAGAAACAGAACCAGACGCAACAGGTTGACCCAGAAGGGCAAGAAGAGAAGCCGAGGAGGACGGCCGTC
TGCTCCCGCGAGGAGTGAGGCCGAGGACTCTTCCGACGAGAGCCTGGGCATCGTGATCGAGGAGATCGAC
CAGGGCGACCTGAGCGGAGAAGAGGACCAGAGCGCGCTGTACGCCACGCTGCAGGCCGCTGCCAGGGAGC
TGGTTAGGCAGTGGGCGCCCTGCAACTCCGAGGGGGAAGAAGACGGTCCCCGCGAGTTCTTGGCTCTGGT
CACCGTCACCGACAAATCGAAGAAAGAAGAGGCAGAGAAGGAGCCAGCTGGGGCCGAATCCATCCGCTTG
AACACCAAAGAAGACAAAAATGGTGTCCCCGACTTAGTGGCCCTGCTGGCTGTGAGAGACACCCCGGACG
AGGAGCCGGTGGACAGCGACACTTCGGAGAGCGACTCGCAGGAAAGTGGGGACCAAGAAACAGAGGAGTT
GGATAATCCTGAGTTCGTGGCCATTGTGGCCTATACCGACCCGTCGGACCCCTGGGCCCGGGAGGAGATG
TTGAAAATCGCTTCTGTTATCGAGTCGCTGGGCTGGAGCGACGAGAAAGACAAGCGAGACCCCCTCCGAC
AGGTCTTGTCCGTCATGTCCAAGGACACTAACGGGACCCGCGTGAAGGTGGAAGAGGCGGGCCGCGAGGT
GGACGCCGTGGTCCTGCGCAAGGCCGGGGATGACGGGGACCTCCGGGAGTGCATTTCCACCTTGGCGCAG
CCGGATCTCCCTCCCCAGGCGAAGAAGGCTGGGCGTGGCCTCTTCGGGGGCTGGAGCGAGCACCGTGAGG
ACGAAGGGGGTCTTCTGGAGCTGGTGGCGCTCCTGGCTGCCCAGGACATGGCGGAGGTGATGAAGGAGGA
AAAAGAAAACGCCTGGGAAGGCGGGAAGTACAAATACCCCAAAGGCAAACTGGGGGAGGTATTGGCGCTC
CTGGCCGCCCGGGAGAACATGGGGTCCAACGAGGGGTCGGAGGAGGCTTCGGACGAACAGTCCGAGGAGG
AGTCGGAGGACACCGAGAGCGAGGCGTCGGAGCCGGAGGACAGGGCATCCAGGAAGCCCCGGGCCAAGAG
GGCGCGCACGGCCCCCAGGGGCCTGACTCCGGCCGGCGCGCCTCCCACCGCTTCCGGGGCCCGCAAAACC
CGCGCGGGCGGCCGAGGCCGAGGCCGGGGCGTCACTCCCGAGAAGAAAGCCGGGAGCCGGGGCTCGGCCC
AGGACGACGCCGCAGGAAGCAGGAAGAAGAAGGGGAGCGCGGGCGCCGGGGCCCATGCCAGGGCAGGCGA
GGCCAAGGGCCAGGCGCCCACTGGATCCAAGGCCGCGCGCGGGAAGAAGGCCCGTCGGGGCCGGAGGCTG
CCCCCTAAATGCCGCTAG

Translation (635 aa):
MAMSLLQDWCRSLDVDAHRALLVTGIPEGLEQADVEAVLQPTLLPLGTFRLRHMKALMNEKAQAALVEFV
EDVNHAAIPREIPGKDGVWRVLWKDRAQDTRVLRQMRRLLLDDGPTQAAEAGTPGEAPTPPASETQAQDS
GEVTGQAGSLLGAARNPRRGRRGRRNRTRRNRLTQKGKKRSRGGRPSAPARSEAEDSSDESLGIVIEEID
QGDLSGEEDQSALYATLQAAARELVRQWAPCNSEGEEDGPREFLALVTVTDKSKKEEAEKEPAGAESIRL
NTKEDKNGVPDLVALLAVRDTPDEEPVDSDTSESDSQESGDQETEELDNPEFVAIVAYTDPSDPWAREEM
LKIASVIESLGWSDEKDKRDPLRQVLSVMSKDTNGTRVKVEEAGREVDAVVLRKAGDDGDLRECISTLAQ
PDLPPQAKKAGRGLFGGWSEHREDEGGLLELVALLAAQDMAEVMKEEKENAWEGGKYKYPKGKLGEVLAL
LAARENMGSNEGSEEASDEQSEEESEDTESEASEPEDRASRKPRAKRARTAPRGLTPAGAPPTASGARKT
RAGGRGRGRGVTPEKKAGSRGSAQDDAAGSRKKKGSAGAGAHARAGEAKGQAPTGSKAARGKKARRGRRL
PPKCR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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