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Report for CCDS14175.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14175.1 Public Homo sapiens X CTPS2 24 110 108 CCDS HistoryNCBI Gene:56474Re-query CCDS DB by CCDS ID:14175.1Re-query CCDS DB by GeneID:56474See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14175.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359276.9 ENSP00000352222.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359276.9Link to Ensembl Protein Viewer:ENSP00000352222.4Re-query CCDS DB by Nucleotide ID:ENST00000359276Re-query CCDS DB by Protein ID:ENSP00000352222
Original member Current member EBI ENST00000380241.7 ENSP00000369590.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380241.7Link to Ensembl Protein Viewer:ENSP00000369590.3Re-query CCDS DB by Nucleotide ID:ENST00000380241Re-query CCDS DB by Protein ID:ENSP00000369590
Original member Current member EBI ENST00000443824.5 ENSP00000401264.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443824.5Link to Ensembl Protein Viewer:ENSP00000401264.1Re-query CCDS DB by Nucleotide ID:ENST00000443824Re-query CCDS DB by Protein ID:ENSP00000401264
Original member Current member NCBI NM_001144002.2 NP_001137474.1 Accepted alive Link to Nucleotide Sequence:NM_001144002.2Link to Protein Sequence:NP_001137474.1Re-query CCDS DB by Nucleotide ID:NM_001144002Re-query CCDS DB by Protein ID:NP_001137474Link to BLAST:NP_001137474.1
Original member Current member NCBI NM_019857.5 NP_062831.3 Accepted alive Link to Nucleotide Sequence:NM_019857.5Link to Protein Sequence:NP_062831.3Re-query CCDS DB by Nucleotide ID:NM_019857Re-query CCDS DB by Protein ID:NP_062831Link to BLAST:NP_062831.3
Original member Current member NCBI NM_175859.3 NP_787055.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175859.3Link to Protein Sequence:NP_787055.1Re-query CCDS DB by Nucleotide ID:NM_175859Re-query CCDS DB by Protein ID:NP_787055Link to BLAST:NP_787055.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137474.1 586 Q9NRF8 586 100% 0 0
NP_062831.3 586 Q9NRF8 586 100% 0 0
NP_787055.1 586 Q9NRF8 586 100% 0 0

Chromosomal Locations for CCDS 14175.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 16590793 16590862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16609541 16609685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16617150 16617246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16620277 16620332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16639147 16639243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16667514 16667557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16667662 16667724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16670580 16670674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16678362 16678450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16683094 16683226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16689450 16689601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16691540 16691620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16693141 16693224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16693371 16693487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16698236 16698336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16698923 16699093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 16702737 16702902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGAAGTACATCCTGGTCACGGGTGGGGTCATCTCAGGCATTGGTAAAGGGATCATTGCCAGCAGCATTG
GAACGATTCTAAAATCATGTGGACTCCGAGTTACTGCCATAAAAATCGACCCCTATATTAACATCGATGC
TGGCACTTTTTCACCTTATGAACACGGTGAAGTCTTCGTCTTAAATGATGGTGGAGAAGTTGATTTAGAC
CTTGGAAATTATGAAAGATTTTTGGATATTAATCTTTATAAAGACAACAATATCACCACGGGGAAGATAT
ATCAGCATGTGATCAATAAAGAGAGGCGTGGTGATTACCTGGGGAAAACAGTGCAAGTTGTCCCTCACAT
TACTGATGCTGTCCAGGAGTGGGTTATGAATCAAGCCAAGGTGCCGGTGGATGGTAATAAGGAAGAGCCC
CAAATATGCGTTATTGAGCTGGGAGGCACCATTGGAGACATCGAAGGAATGCCGTTTGTGGAGGCGTTTA
GACAATTCCAGTTTAAGGCGAAAAGAGAGAATTTCTGTAATATCCACGTTAGCCTTGTCCCACAGCTCAG
TGCTACCGGAGAACAAAAAACCAAACCCACCCAAAACAGCGTCCGCGCACTGAGGGGTTTAGGCCTGTCT
CCAGATCTGATTGTCTGCCGAAGTTCAACGCCCATTGAGATGGCCGTGAAGGAGAAGATTTCTATGTTTT
GTCACGTGAACCCTGAACAGGTCATATGTATCCATGATGTTTCTTCCACATACCGAGTTCCTGTGCTTTT
AGAGGAACAAAGCATTGTGAAATATTTTAAGGAGAGATTGCACCTGCCCATCGGTGATTCTGCAAGTAAT
TTGCTTTTTAAGTGGAGAAATATGGCTGACAGGTATGAAAGGTTACAGAAAATATGCTCCATAGCCCTGG
TTGGCAAATACACCAAGCTCAGAGACTGCTACGCCTCTGTGTTCAAAGCCCTGGAACACTCAGCCCTGGC
CATCAACCACAAGTTGAATCTGATGTACATAGACTCCATTGATCTGGAGAAGATCACTGAAACCGAGGAC
CCTGTGAAATTTCATGAAGCTTGGCAGAAGCTATGCAAAGCTGATGGTATTCTTGTGCCTGGAGGCTTTG
GAATCAGAGGAACATTGGGAAAACTCCAGGCGATTTCTTGGGCAAGGACAAAGAAGATTCCTTTTCTGGG
AGTTTGTCTTGGGATGCAACTAGCAGTGATAGAGTTTGCAAGAAACTGCCTTAACTTGAAAGATGCTGAT
TCCACAGAGTTTAGGCCAAATGCCCCAGTTCCTCTGGTGATTGATATGCCCGAGCACAACCCTGGCAATT
TGGGAGGAACAATGAGACTGGGAATAAGAAGAACTGTTTTCAAAACTGAAAATTCAATATTAAGGAAACT
TTATGGTGATGTTCCTTTTATAGAAGAAAGACACAGACATCGGTTCGAGGTAAACCCTAACCTGATCAAA
CAATTTGAGCAGAATGACTTAAGTTTTGTAGGTCAGGATGTTGATGGAGACAGGATGGAAATCATTGAAC
TGGCAAATCATCCTTATTTTGTTGGTGTCCAGTTCCATCCTGAGTTTTCTTCTAGGCCGATGAAGCCTTC
CCCTCCGTATCTGGGGCTGTTACTTGCAGCAACTGGGAACCTGAATGCCTACTTGCAACAGGGTTGCAAA
CTGTCTTCCAGTGATAGATACAGTGATGCCAGTGATGACAGCTTTTCAGAGCCAAGGATAGCTGAGTTGG
AAATAAGCTGA

Translation (586 aa):
MKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFVLNDGGEVDLD
LGNYERFLDINLYKDNNITTGKIYQHVINKERRGDYLGKTVQVVPHITDAVQEWVMNQAKVPVDGNKEEP
QICVIELGGTIGDIEGMPFVEAFRQFQFKAKRENFCNIHVSLVPQLSATGEQKTKPTQNSVRALRGLGLS
PDLIVCRSSTPIEMAVKEKISMFCHVNPEQVICIHDVSSTYRVPVLLEEQSIVKYFKERLHLPIGDSASN
LLFKWRNMADRYERLQKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETED
PVKFHEAWQKLCKADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVCLGMQLAVIEFARNCLNLKDAD
STEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHRHRFEVNPNLIK
QFEQNDLSFVGQDVDGDRMEIIELANHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATGNLNAYLQQGCK
LSSSDRYSDASDDSFSEPRIAELEIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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